Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0178 ATGAGGTTTGAATCTACCTTGCATGCACGGAAAACAAACAAAAATACTTACAAGATATTCATTACAGCAGAGTATAGTGGTGTGGAAGTTAAACTTGCACCAAATTTTGAGATGGGTGTTTCTAATAAAACTCCTCAATATCTCAACATGAACCCTATTGGCAAGGTTCCTGTGTTGGAAACACCAAATGGTCCAATATTTGAGAGTAATGCAATTGCTCGCTATGTTGCTCGGTTGAAGAGTGACAATGCATTGTATGGATCTTCTCTCATTGACTATGCTCAAATTGAACAGTGGATTGACTTTTCCACATTAGAAATAGACGCTAATATTAATGCTTGGTACCGACCAAGAAATGGACAAGCCCCTTACCATCTTCCCGTTGAGGAAGCTAAAATTTCTGCATTGAAGAGAGCCTTGGGGGCATTGAACACTCACCTCGCTTCTAATACTTACCTGGTTGGGCAATCTGTGACCTTAGCTGACATCATCATGACGTGCAATTTGCATAGAGGTTTCACTCGCCTCATGACCAAGGGCTTCACCTCAGAGTTCCCTCACGTAGAGAGATACTTTTGGGCCTTAGTCCATGAGCCCAAATTCCAAACGATCATAGGTGACGTTAAGCAGACTGAGGCTGTTCTTCCTCTGCAAGCTCCACAGATGCCTTATTAA 675 0.4222 MRFESTLHARKTNKNTYKIFITAEYSGVEVKLAPNFEMGVSNKTPQYLNMNPIGKVPVLETPNGPIFESNAIARYVARLKSDNALYGSSLIDYAQIEQWIDFSTLEIDANINAWYRPRNGQAPYHLPVEEAKISALKRALGALNTHLASNTYLVGQSVTLADIIMTCNLHRGFTRLMTKGFTSEFPHVERYFWALVHEPKFQTIIGDVKQTEAVLPLQAPQMPY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0178 224 Gene3D Glutaredoxin 3 76 - -
Prci3g0178 224 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 6 218 IPR044628 GO:0004364
Prci3g0178 224 FunFam Elongation factor 1B gamma 3 76 - -
Prci3g0178 224 FunFam Elongation factor 1 gamma 82 218 - -
Prci3g0178 224 Gene3D - 82 218 - -
Prci3g0178 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 217 IPR010987 -
Prci3g0178 224 SFLD Main (cytGST) 6 192 - -
Prci3g0178 224 SUPERFAMILY Thioredoxin-like 6 87 IPR036249 -
Prci3g0178 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Prci3g0178 224 CDD GST_N_EF1Bgamma 6 79 - -
Prci3g0178 224 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Prci3g0178 224 CDD GST_C_EF1Bgamma_like 92 212 - -
Prci3g0178 224 Pfam Glutathione S-transferase, N-terminal domain 14 78 IPR004045 -
Prci3g0178 224 Pfam Glutathione S-transferase, C-terminal domain 132 199 IPR004046 -
Prci3g0178 224 SFLD Glutathione Transferase (cytosolic) 6 192 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0178 Prci-Chr3 2621022 2626827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0178 6 221 Eukaryotic Initiation Factors Gene Family AT1G57720 64.840 4.95e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0178 K03233 - zju:107412556 338.576