Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0170 ATGGCCCTTGATGCTGGTTCATCCTCTTCCTCTGCTCAAATATTCGTTCCCAAAAAGTATGATGTATTCATCAGCTTTAGGGGTGAGGACACTCGCACCAACTTCACTAGCCATCTTTATGAAGCTTTTTGTCAAAAACACATCAAAACGTACATAGACTACCAACTTCCCAAAGGAGATGAGATCTCACCAGCACTTATGAAAGCAATAGAGGATTCCTTTGCATCTGTGGTGGTCTTCTCTGAAAATTATGCTTCTTCAAGATGGTGCTTGGAAGAACTCACCCAAATAGTTCATCGCAAGAGAGTTCAAGGGCAGATTGTGATTCCTGTGTTCTATAAAGTTGAGCCATCTCATGTTCGCAACCAGACTGGGCTTTACAAACAAGCATTTGAGAAATATGAGAGAGATCTTAAGGTCAACCAACACAAGGTTAAAATATGGAAGGAAGCTCTCACTGAGGCTGCAAACTTAGCTGGTTGGGACTCTCACGCATTTAGGGATGAATCTGAATTAATTCAAAAGACTATCAAAGACATATTGCGAAAATTGAATTACAAGTACCCACCTGCTGAATTGAAAGGACTTGTAGGAATTGATGACAATTGCTCAGAAGTAGAATTACTGTTGAGAGATTTTGAAACCGTAGGAATTTGGGGCATGGGGGGAATTGGCAAATCAACCATTGCCAAAACTATATTTGTGAGGTACTCCTCCCATTATGAAGGCTCTTGCTTCTTGGCAAATGTAAGGGAAAATTCTAAGTATGGATTTGGTGATTTACGTCATAAATTTCTCTCCTGCCTACTAAAGGAAGATCTCTTTATTGATACTTCAACAACTTTTGCTGGGTCAAGGCTTAGTCGTATGAAAGTTTTTGTTGTTCTTGATGATATTAATTCTTTAGAGCAGTTGGAATGCTTGGTTGGAGAAACTCTTTGCTTTGGTCGAGGAAGTAGAATTCTCATCACTTCTAGAGACAAGCATGTGCTTAGCAAAGGAGTTAAGGTAATATATAAGGTTAAGGAATTGGAGTTCCGTCAATCCCTTGAACTTTTTAGCTTGAATGCCTTCAACACTAACTTTCCTATAATGGGATTTGAAGAGCTAACAAGAAGAGCAGTTGCTTATGCAAAAGGAATTCCACTGGCTTTGAAAGTTTTGGGTTCATTTCTCCATGGCAAAAGTAAAATTGAATGGAATAGTGCATTAAAAAGGCTTCAAAAGATTCCTCATGAAGATATTCAAAAAGTGTTGAGATTGAGTTATGATGGATTGAATCATGAAGAGAAGAACATATTTTTAGATATTGCATGCTTTTTGAAGGGAATGTCAAAAGAACATGTGATCAGCTTGTTGGACAGCTACGACTTCCATGGACGTATTGGTATAAGAATACTTCATGATAAGTCTCTTATAAATGCTGAATATGATCACCAGCCCATAGAAATGCATGATTTGATTCAAGAAATGGGCTTTGAAATTGTCCGCGAAGAATCTATTGATAAACCTGAAAGACGTAGCAGATTATGGGATCCTAAAGAAATCTACAACATCTTAGCCTATGATACGGGAACAAACAAAGTTCAAGGTATCAAATTGAACGTTTCACAAATTAGAGATGTTCATTTGGAAGCCAACATTTTCAGAAAGATGCCTAATGTATCTAGAGTGGTGCAGATTCCCACTTAA 1692 0.38 MALDAGSSSSSAQIFVPKKYDVFISFRGEDTRTNFTSHLYEAFCQKHIKTYIDYQLPKGDEISPALMKAIEDSFASVVVFSENYASSRWCLEELTQIVHRKRVQGQIVIPVFYKVEPSHVRNQTGLYKQAFEKYERDLKVNQHKVKIWKEALTEAANLAGWDSHAFRDESELIQKTIKDILRKLNYKYPPAELKGLVGIDDNCSEVELLLRDFETVGIWGMGGIGKSTIAKTIFVRYSSHYEGSCFLANVRENSKYGFGDLRHKFLSCLLKEDLFIDTSTTFAGSRLSRMKVFVVLDDINSLEQLECLVGETLCFGRGSRILITSRDKHVLSKGVKVIYKVKELEFRQSLELFSLNAFNTNFPIMGFEELTRRAVAYAKGIPLALKVLGSFLHGKSKIEWNSALKRLQKIPHEDIQKVLRLSYDGLNHEEKNIFLDIACFLKGMSKEHVISLLDSYDFHGRIGIRILHDKSLINAEYDHQPIEMHDLIQEMGFEIVREESIDKPERRSRLWDPKEIYNILAYDTGTNKVQGIKLNVSQIRDVHLEANIFRKMPNVSRVVQIPT 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0170 563 PRINTS Disease resistance protein signature 286 300 - -
Prci3g0170 563 PRINTS Disease resistance protein signature 378 392 - -
Prci3g0170 563 PRINTS Disease resistance protein signature 215 230 - -
Prci3g0170 563 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Prci3g0170 563 SMART till_3 19 158 IPR000157 GO:0007165
Prci3g0170 563 Gene3D - 181 340 IPR027417 -
Prci3g0170 563 Pfam TIR domain 19 197 IPR000157 GO:0007165
Prci3g0170 563 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 427 - -
Prci3g0170 563 Gene3D - 17 180 IPR035897 -
Prci3g0170 563 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Prci3g0170 563 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 554 IPR044974 GO:0006952
Prci3g0170 563 Pfam NB-ARC domain 212 424 IPR002182 GO:0043531
Prci3g0170 563 Gene3D - 344 427 IPR042197 -
Prci3g0170 563 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 437 IPR027417 -
Prci3g0170 563 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Prci3g0170 563 SUPERFAMILY "Winged helix" DNA-binding domain 414 520 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0170 Prci-Chr3 2566577 2569192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0170 18 555 WRKY Transcription Factor Family AT4G12020 31.091 2.94e-67 235