Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0169 ATGGCCCTTGATGCTGGTTCATCCTCTTCCTCTGCTCAAATATTCGTTCCCAAAAAGTATGATGTATTCATCAGCTTTAGGGGTGAGGACACTCGCACCAACTTCACTAGCCATCTTTATGAAGCTTTTTGTCAAAAACACATCAAAACGTACATAGACTACCAACTTCCCAAAGGAGATGAGATCTCACCAGCACTTATGAAAGCAATAGAGGATTCCTTTGCATCTGTGGTGGTCTTCTCTGAAAATTATGCTTCTTCAAGATGGTGCTTGGAAGAACTCACCCAAATAGTTCATCGCAAGAGAGTTCAAGGGCAGATTGTGATTCCTGTGTTCTATAAAGTTGAGCCATCTCATGTTCGCAACCAGACTGGGCTTTACAAACAAGCATTTGAGAAATATGAGAGAGATCTTAAGGTCAACCAACACAAGGTTAAAATATGGAAGGAAGCTCTCACTGAGGCTGCAAACTTAGCTGGTTGGGACTCTCACGCATTTAGGGATGAATCTGAATTAATTCAAAAGACTATCAAAGACATATTGCGAAAATTGAATTACAAGTACCCACCTGCTGAATTGAAAGGACTTGTAGGAATTGATGACAATTGCTCAGAAGTAGAATTACTGTTGAGAGATTTTGAAACCGTAGGAATTTGGGGCATGGGGGGAATTGGCAAATCAACCATTGCCAAAACTATATTTGTGAGGTACTCCTCCCATTATGAAGGCTCTTGCTTCTTGGCAAATGTAAGGGAAAATTCTAAGTATGGATTTGGTGATTTACGTCATAAATTTCTCTCCTGCCTACTAAAGGAAGATCTCTTTATTGATACTTCAACAACTTTTGCTGGGTCAAGGCTTAGTCGTATGAAAGTTTTTGTTGTTCTTGATGATATTAATTCTTTAGAGCAGTTGGAATGCTTGGTTGGAGAAACTCTTTGCTTTGGTCGAGGAAGTAGAATTCTCATCACTTCTAGAGACAAGCATGTGCTTAGCAAAGGAGTTAAGGTAATATATAAGGTTAAGGAATTGGAGTTCCGTCAATCCCTTGAACTTTTTAGCTTGAATGCCTTCAACACTAACTTTCCTATAATGGGATTTGAAGAGCTAACAAGAAGAGCAGTTGCTTATGCAAAAGGAATTCCACTGGCTTTGAAAGTTTTGGGTTCATTTCTCCATGGCAAAAGTAAAATTGAATGGAATAGTGCATTAAAAAGGCTTCAAAAGATTCCTCATGAAGATATTCAAAAAGTGTTGAGATTGAGTTATGATGGATTGAATCATGAAGAGAAGAACATATTTTTAGATATTGCATGCTTTTTGAAGGGAATGTCAAAAGAACATGTGATCAGCTTGTTGGACAGCTACGACTTCCATGGACGTATTGGTATAAGAATACTTCATGATAAGTCTCTTATAAATGCTGAATATGATCACCAGCCCATAGAAATGCATGATTTGATTCAAGAAATGGGCTTTGAAATTGTCCGCGAAGAATCTATTGATAAACCTGAAAGACGTAGCAGATTATGGGATCCTAAAGAAATCTACAACATCTTAGCCTATGATACGGGAACAAACAAAGTTCAAGGTATCAAATTGAACGTTTCACAAATTAGAGATGTTCATTTGGAAGCCAACATTTTCAGAAAGATGCCTAATGTAAGATATCTCAAATTTTATTCTACTTCCAACAATAGCTCAAGCCATGTGCATCTTCCAAAAGGCCTCAAGTGTCTTCCAAATCAAATTAGGTATCTAGAGTGGTGCAGATTCCCACTTAAATCCATGCCATCAACTTTTTGTCCAGAGAAACTGGTTGAGCTTCACATGCCCAATAGCCACGTTATAAAGCTTTGGAATGGAGTGCATGAAACAAAGTGCCAGAGTGGTTCAAATATGAGGCTGCACAAAGCTCCGTAA 1923 0.3833 MALDAGSSSSSAQIFVPKKYDVFISFRGEDTRTNFTSHLYEAFCQKHIKTYIDYQLPKGDEISPALMKAIEDSFASVVVFSENYASSRWCLEELTQIVHRKRVQGQIVIPVFYKVEPSHVRNQTGLYKQAFEKYERDLKVNQHKVKIWKEALTEAANLAGWDSHAFRDESELIQKTIKDILRKLNYKYPPAELKGLVGIDDNCSEVELLLRDFETVGIWGMGGIGKSTIAKTIFVRYSSHYEGSCFLANVRENSKYGFGDLRHKFLSCLLKEDLFIDTSTTFAGSRLSRMKVFVVLDDINSLEQLECLVGETLCFGRGSRILITSRDKHVLSKGVKVIYKVKELEFRQSLELFSLNAFNTNFPIMGFEELTRRAVAYAKGIPLALKVLGSFLHGKSKIEWNSALKRLQKIPHEDIQKVLRLSYDGLNHEEKNIFLDIACFLKGMSKEHVISLLDSYDFHGRIGIRILHDKSLINAEYDHQPIEMHDLIQEMGFEIVREESIDKPERRSRLWDPKEIYNILAYDTGTNKVQGIKLNVSQIRDVHLEANIFRKMPNVRYLKFYSTSNNSSSHVHLPKGLKCLPNQIRYLEWCRFPLKSMPSTFCPEKLVELHMPNSHVIKLWNGVHETKCQSGSNMRLHKAP 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0169 640 Gene3D - 17 181 IPR035897 -
Prci3g0169 640 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 627 IPR044974 GO:0006952
Prci3g0169 640 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Prci3g0169 640 SMART till_3 19 158 IPR000157 GO:0007165
Prci3g0169 640 PRINTS Disease resistance protein signature 215 230 - -
Prci3g0169 640 PRINTS Disease resistance protein signature 378 392 - -
Prci3g0169 640 PRINTS Disease resistance protein signature 286 300 - -
Prci3g0169 640 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Prci3g0169 640 FunFam Disease resistance protein (TIR-NBS-LRR class) 345 427 - -
Prci3g0169 640 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Prci3g0169 640 Gene3D - 182 340 IPR027417 -
Prci3g0169 640 Gene3D - 344 427 IPR042197 -
Prci3g0169 640 Pfam NB-ARC domain 212 423 IPR002182 GO:0043531
Prci3g0169 640 Pfam TIR domain 19 197 IPR000157 GO:0007165
Prci3g0169 640 Gene3D Ribonuclease Inhibitor 517 634 IPR032675 -
Prci3g0169 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 437 IPR027417 -
Prci3g0169 640 SUPERFAMILY "Winged helix" DNA-binding domain 414 520 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0169 Prci-Chr3 2566577 2572955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0169 18 634 WRKY Transcription Factor Family AT4G12020 32.273 2.21e-89 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0169 - - pcin:129306877 1261.9