LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g0167	ATGGCCCTTGATGCTGGTTCATCCTCTTCCTCTGCTCAAATATTCGTTCCCAAAAAGTATGATGTATTCATCAGCTTTAGGGGTGAGGACACTCGCACCAACTTCACTAGCCATCTTTATGAAGCTTTTTGTCAAAAACACATCAAAACGTACATAGACTACCAACTTCCCAAAGGAGATGAGATCTCACCAGCACTTATGAAAGCAATAGAGGATTCCTTTGCATCTGTGGTGGTCTTCTCTGAAAATTATGCTTCTTCAAGATGGTGCTTGGAAGAACTCACCCAAATAGTTCATCGCAAGAGAGTTCAAGGGCAGATTGTGATTCCTGTGTTCTATAAAGTTGAGCCATCTCATGTTCGCAACCAGACTGGGCTTTACAAACAAGCATTTGAGAAATATGAGAGAGATCTTAAGGTCAACCAACACAAGGTTAAAATATGGAAGGAAGCTCTCACTGAGGCTGCAAACTTAGCTGGTTGGGACTCTCACGCATTTAGGGATGAATCTGAATTAATTCAAAAGACTATCAAAGACATATTGCGAAAATTGAATTACAAGTACCCACCTGCTGAATTGAAAGGACTTGTAGGAATTGATGACAATTGCTCAGAAGTAGAATTACTGTTGAGAGATTTTGAAACCGTAGGAATTTGGGGCATGGGGGGAATTGGCAAATCAACCATTGCCAAAACTATATTTGTGAGGTACTCCTCCCATTATGAAGGCTCTTGCTTCTTGGCAAATGTAAGGGAAAATTCTAAGTATGGATTTGGTGATTTACGTCATAAATTTCTCTCCTGCCTACTAAAGGAAGATCTCTTTATTGATACTTCAACAACTTTTGCTGGGTCAAGGCTTAGTCGTATGAAAGTTTTTGTTGTTCTTGATGATATTAATTCTTTAGAGCAGTTGGAATGCTTGGTTGGAGAAACTCTTTGCTTTGGTCGAGGAAGTAGAATTCTCATCACTTCTAGAGACAAGCATGTGCTTAGCAAAGGAGTTAAGGTAATATATAAGGTTAAGGAATTGGAGTTCCGTCAATCCCTTGAACTTTTTAGCTTGAATGCCTTCAACACTAACTTTCCTATAATGGGATTTGAAGAGCTAACAAGAAGAGCAGTTGCTTATGCAAAAGGAATTCCACTGGCTTTGAAAGTTTTGGGTTCATTTCTCCATGGCAAAAGTAAAATTGAATGGAATAGTGCATTAAAAAGGCTTCAAAAGATTCCTCATGAAGATATTCAAAAAGTGTTGAGATTGAGTTATGATGGATTGAATCATGAAGAGAAGAACATATTTTTAGATATTGCATGCTTTTTGAAGGGAATGTCAAAAGAACATGTGATCAGCTTGTTGGACAGCTACGACTTCCATGGACGTATTGGTATAAGAATACTTCATGATAAGTCTCTTATAAATGCTGAATATGATCACCAGCCCATAGAAATGCATGATTTGATTCAAGAAATGGGCTTTGAAATTGTCCGCGAAGAATCTATTGATAAACCTGAAAGACGTAGCAGATTATGGGATCCTAAAGAAATCTACAACATCTTAGCCTATGATACGGGAACAAACAAAGTTCAAGGTATCAAATTGAACGTTTCACAAATTAGAGATGTTCATTTGGAAGCCAACATTTTCAGAAAGATGCCTAATGTAAGATATCTCAAATTTTATTCTACTTCCAACAATAGCTCAAGCCATGTGCATCTTCCAAAAGGCCTCAAGTGTCTTCCAAATCAAATTAGGTATCTAGAGTGGTGCAGATTCCCACTTAAATCCATGCCATCAACTTTTTGTCCAGAGAAACTGGTTGAGCTTCACATGCCCAATAGCCACGTTATAAAGCTTTGGAATGGAGTGCATGATTTTGTTAACTTAAAAATCATAAACCTTAAGAGATCCAAGGAACTGAAGGAGCTTCCGAATTGCTCCAAAGCCTCAAATCTCGCGGTAGTGGAACTTGCTGGTTGTGTTAGTCTACGTTACATTCATGCTTCAATTTTGTCCCTTCACTCACTTGTTAGATTGGACTTATATTGGTGCAAGAAACTTAAGAGTCTAATAAGTGATGTCCATTTAAAATCTCTACAATCTATTGAAGTTGGATACTGTTCAAACCTCAAGGAGTTTTCACTGTCATCGAAAAAATTGATGGGATTGGATTTATCTGAAACAGGAATTGAGATATTACACTCGTCAATAGGGTGCTCGAGTGAATTGGTAAAGCTTGATCTCAGTGGCTTAAGACTTGTCGACCTTCCAAACCAATTATCTTGCTTAAGAAGTTTGAAGGTGTTTAAGCTTTCCAATTGTGAAGTCATTGATGATTGA	2340	0.3791	MALDAGSSSSSAQIFVPKKYDVFISFRGEDTRTNFTSHLYEAFCQKHIKTYIDYQLPKGDEISPALMKAIEDSFASVVVFSENYASSRWCLEELTQIVHRKRVQGQIVIPVFYKVEPSHVRNQTGLYKQAFEKYERDLKVNQHKVKIWKEALTEAANLAGWDSHAFRDESELIQKTIKDILRKLNYKYPPAELKGLVGIDDNCSEVELLLRDFETVGIWGMGGIGKSTIAKTIFVRYSSHYEGSCFLANVRENSKYGFGDLRHKFLSCLLKEDLFIDTSTTFAGSRLSRMKVFVVLDDINSLEQLECLVGETLCFGRGSRILITSRDKHVLSKGVKVIYKVKELEFRQSLELFSLNAFNTNFPIMGFEELTRRAVAYAKGIPLALKVLGSFLHGKSKIEWNSALKRLQKIPHEDIQKVLRLSYDGLNHEEKNIFLDIACFLKGMSKEHVISLLDSYDFHGRIGIRILHDKSLINAEYDHQPIEMHDLIQEMGFEIVREESIDKPERRSRLWDPKEIYNILAYDTGTNKVQGIKLNVSQIRDVHLEANIFRKMPNVRYLKFYSTSNNSSSHVHLPKGLKCLPNQIRYLEWCRFPLKSMPSTFCPEKLVELHMPNSHVIKLWNGVHDFVNLKIINLKRSKELKELPNCSKASNLAVVELAGCVSLRYIHASILSLHSLVRLDLYWCKKLKSLISDVHLKSLQSIEVGYCSNLKEFSLSSKKLMGLDLSETGIEILHSSIGCSSELVKLDLSGLRLVDLPNQLSCLRSLKVFKLSNCEVIDD	779

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g0167	779	FunFam	Disease resistance protein (TIR-NBS-LRR class)	16	186	-	-
	Prci3g0167	779	FunFam	Disease resistance protein (TIR-NBS-LRR class)	345	427	-	-
	Prci3g0167	779	Pfam	TIR domain	19	197	IPR000157	GO:0007165
	Prci3g0167	779	ProSiteProfiles	TIR domain profile.	18	184	IPR000157	GO:0007165
	Prci3g0167	779	SMART	till_3	19	158	IPR000157	GO:0007165
	Prci3g0167	779	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	20	750	IPR044974	GO:0006952
	Prci3g0167	779	Gene3D	-	17	181	IPR035897	-
	Prci3g0167	779	Gene3D	Ribonuclease Inhibitor	518	717	IPR032675	-
	Prci3g0167	779	Gene3D	Ribonuclease Inhibitor	718	779	IPR032675	-
	Prci3g0167	779	SUPERFAMILY	Toll/Interleukin receptor TIR domain	10	161	IPR035897	-
	Prci3g0167	779	Gene3D	-	182	339	IPR027417	-
	Prci3g0167	779	SUPERFAMILY	L domain-like	484	776	-	-
	Prci3g0167	779	Gene3D	-	344	427	IPR042197	-
	Prci3g0167	779	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	180	437	IPR027417	-
	Prci3g0167	779	Pfam	NB-ARC domain	212	423	IPR002182	GO:0043531
	Prci3g0167	779	PRINTS	Disease resistance protein signature	671	687	-	-
	Prci3g0167	779	PRINTS	Disease resistance protein signature	215	230	-	-
	Prci3g0167	779	PRINTS	Disease resistance protein signature	286	300	-	-
	Prci3g0167	779	PRINTS	Disease resistance protein signature	378	392	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g0167	Prci-Chr3	2566577	2572959	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g0167	18	774	WRKY Transcription Factor Family	AT4G12020	32.905	2.52e-103	347

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g0167	-		-	pcin:129306877	1559.27