Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0139 ATGCCAGATCTATTCCTGAGATGTGCTGCTCCGGTGCTTCTGAGATGGAATCACTTTTTACATACTTTCGGGCATCCAGATGGCAGGACTCTTATCAAGTCGCACAAATTAAAACAAGGGACAACCGACATTGATCTCGTACTCGATTTCTTTGGAGTGGACCCAACAAAAGGTCTTTCTGATGGTCAGGTGGCACAGCATGCCAGACTTTATGGTATAAACGTGCTGCCGGAAGAAAGAAGGGCTCCTTTTTGGAAATTGGTCTTGAAACAATTTGATGATTTGCTTGTGAAGATATTAATAGCAGCTGCACTTATCTCTTTCATTCTGGCTTTAATCAATGGAGAAACGGGCTTAATGGCATTTCTGGAGCCTTCTGTTATTCTAATGATATTGGCTGCAAATGCAGCAGTTGGGGTGATTACAGAAACAAATGCTGAAAAGGCTCTTGAGGAGCTACGGGCCTATCAAGCTGATGTTGCAACTGTACTTCGAAATGGTTGTTTTTCCATACTTCCAGCAACTGAAATTGTTCCTGGCGATATTGTGGAAGTTTCTGTTGGGTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGCTGAGTAATGAAGTACGTGTTGATCAGGCTATTCTTACAGGTGAGAGCAACTCTGTGGAAAAAGAGCTTGAAACTACCACAGCAACAAATGCTGTATATCAAGACAAAACAAACATATTGTTCTCGGGAACAGTTGTGGTTGCTGGTAGGGCAAGAGCAATTGTGGTGGGAGTTGGTCATAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCAAACAGAAGATGAGGTGACACCATTGAAGAAGAAGCTGGATGAGTTTGGTACCTTTTTGGCCAAGGTGATTGCTAGTTGTATGCATTACATTTTAGTGTTCATTCTGCTAGCAAATTCAGTTTTTGTTATGGTTCCTTTTGAATACTGGGTCCTGCATTTTATTGTCTGTCAAGATGCCATTTTGGTTTCCTGA 1011 0.4204 MPDLFLRCAAPVLLRWNHFLHTFGHPDGRTLIKSHKLKQGTTDIDLVLDFFGVDPTKGLSDGQVAQHARLYGINVLPEERRAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATEIVPGDIVEVSVGCKIPADMRMIEMLSNEVRVDQAILTGESNSVEKELETTTATNAVYQDKTNILFSGTVVVAGRARAIVVGVGHNTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIASCMHYILVFILLANSVFVMVPFEYWVLHFIVCQDAILVS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0139 336 SUPERFAMILY Calcium ATPase, transmembrane domain M 43 309 IPR023298 -
Prci3g0139 336 SMART Cation_ATPase_N_a_2 38 112 IPR004014 -
Prci3g0139 336 Coils Coil 146 166 - -
Prci3g0139 336 PANTHER CALCIUM-TRANSPORTING ATPASE 47 307 - -
Prci3g0139 336 Pfam Cation transporter/ATPase, N-terminus 44 107 IPR004014 -
Prci3g0139 336 Pfam E1-E2 ATPase 157 312 - -
Prci3g0139 336 SUPERFAMILY Calcium ATPase, transduction domain A 159 270 IPR008250 -
Prci3g0139 336 Gene3D - 90 310 - -
Prci3g0139 336 FunFam Calcium-transporting ATPase 147 272 - -
Prci3g0139 336 Gene3D - 57 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0139 Prci-Chr3 1954800 1973817 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0139 47 297 Primary Pumps ATPases(2) AT1G10130 84.064 2.42e-144 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0139 K05853 - pcin:129307281 633.639