Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0123 ATGGAACAGTACGAGAAAGTCGAGAAGATAGGTGAAGGCACCTATGGTGTGGTTTACAAGGCTCGTGATCGTGTCACGAATCAGACCATAGCTTTGAAGAAAATTCGATTGGAGCAGGAAGATGAGGGAGTGCCTAGCACTGCGATTCGAGAGATTTCGCTCTTGAAAGAAATGCAGCATCGGAATATTGTTAGGTTACAGGATGTAGTACACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTGGACTTGGATCTGAAGAAGCACATGGATTCATCTCCTGATTTTGCAAAAGATCATCGACAAATAAAAATGTTTCTTTATCAAATTCTCTGTGGCATTGCTTACTGTCACTCACATAGAGTTCTTCATCGAGACTTGAAACCACAGAATTTGTTGATAGATCGCAGCACTAATTCACTAAAGCTTGCAGATTTTGGATTGGCCAGGGCATTTGGTATTCCTGTCAAGACATTTACACATGAGTCAAAAGTGAAGGAGCATGCTGAGTCAGCGTGCTATCAAGTGAGGTCACAAAAAAACTCTGTGGTGACACTATGGTACAGAGCGCCAGAAATATTGCTTGGATCTCGCCAGTACTCTACCCCAGTTGATGTTTGGTCAGTAGGCTGTATATTTGCAGAGATGGTAAACCAGCGACCACTGTTTCCTGGGGACTCTGAGATTGATGAGATTTTTAAAATATTCGGGACCATGGGTACGCCAAATGAGGATACATGGCCTGGAGTGAATTCTTTGCCTGATTTTAAATCAACCTTTCCGAGGTGGACTCCAAAGGACCTGGCAACTGTGGTTCCGAATCTTGAGCCAGCTGGCATCGATCTTCTTTCTAGTATGCTTTGCTTGGATCCCAGCAGAAGAATTACAGCCAGGAACGCTCTTGAGCATGAGTACTTCAAAGACATTAGATTTGTAGTCTGA 945 0.4339 MEQYEKVEKIGEGTYGVVYKARDRVTNQTIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKDHRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSTNSLKLADFGLARAFGIPVKTFTHESKVKEHAESACYQVRSQKNSVVTLWYRAPEILLGSRQYSTPVDVWSVGCIFAEMVNQRPLFPGDSEIDEIFKIFGTMGTPNEDTWPGVNSLPDFKSTFPRWTPKDLATVVPNLEPAGIDLLSSMLCLDPSRRITARNALEHEYFKDIRFVV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0123 314 Gene3D Phosphorylase Kinase; domain 1 1 84 - -
Prci3g0123 314 FunFam cyclin-dependent kinase 1 isoform X2 183 312 - -
Prci3g0123 314 Pfam Protein kinase domain 4 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0123 314 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Prci3g0123 314 ProSiteProfiles Protein kinase domain profile. 4 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0123 314 SMART serkin_6 4 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0123 314 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Prci3g0123 314 CDD STKc_CDK1_CdkB_like 4 307 - -
Prci3g0123 314 PANTHER CELL DIVISION PROTEIN KINASE 2 307 - -
Prci3g0123 314 SUPERFAMILY Protein kinase-like (PK-like) 1 311 IPR011009 -
Prci3g0123 314 Gene3D Transferase(Phosphotransferase) domain 1 86 312 - -
Prci3g0123 314 FunFam Cell division control protein 2 1 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0123 Prci-Chr3 1814563 1829955 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0123 1 310 Core Cell Cycle Gene Families AT3G48750 78.710 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Prci3g0123 Pkinase 9e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0123 K02206 - qsa:O6P43_013208 545.814