Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0121 ATGGTTCAAGGAATCGGTACTCGACTCTTTGTGAGCAGATTATCGTTCTTCACAACAGATAGCCACCTCAGAAATCTTTTTTCCCCATTCGGAATAATTACAGAAGCTTTTCTAGTGATGGACCCAAAAACTCAAAGGCCCAAAGGATTTGGCTTTGTCTCCTACGAGTCAGAAATTGAAGCAGAGAAGGCTATGAACGCCATGAATGGCAGGATAATTGATGGAAGGCTGATTTTCGTAGAACCTGCCAAAGCTTCAAGACCTAACAATGATGCTTAG 279 0.4229 MVQGIGTRLFVSRLSFFTTDSHLRNLFSPFGIITEAFLVMDPKTQRPKGFGFVSYESEIEAEKAMNAMNGRIIDGRLIFVEPAKASRPNNDA 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0121 92 SMART rrm1_1 8 81 IPR000504 GO:0003723
Prci3g0121 92 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 85 IPR000504 GO:0003723
Prci3g0121 92 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 8 85 - -
Prci3g0121 92 Gene3D - 3 92 IPR012677 -
Prci3g0121 92 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 2 88 - -
Prci3g0121 92 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 78 IPR000504 GO:0003723
Prci3g0121 92 SUPERFAMILY RNA-binding domain, RBD 7 88 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0121 Prci-Chr3 1793337 1795468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0121 6 84 Eukaryotic Initiation Factors Gene Family AT2G23350 37.975 1.10e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0121 - K13195 pcin:129306862 184.882