Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0120 ATGTGCAGCAGCATCTTTGGCTCAATCATGGACAACAATTTTCATCAAGGCGATTTAACTGATATATTCCGTGCAAGTAGCGGCGGTGGCAGCGGTGCCGGAGGTGGTGGCCGTGGCGGTGGTTCTTATGGCACTTCTTCTTCAGCATCTGAATTAGCTCCTCATGATCTCTCTTCTACTTCATCAGAAAGCTGGCACCACCACCACCACCAGATGAATTTCTCTTCTGTGATAATGGAAGATTCTCTCAGAGCCACCAACTTTTTTGGCGACCCGTTCTCGAACATGCGAGATCCCTTTCTTCAAGACCTTGATTTCCCCTTACCTTCTTCCTACTTCAGTTCTGCAATTAATAATTCTGCCATGGAAGATGCATCGCCTGGTTTTTCTGATTCTTCTGTTGTTTTGTCGTCTCATCACAAGCTTGTAGAAGATGATATGAGAATAAGGCCCCCTGTAGCAGCAGCAGCTTGTAACAACAACACCATATTCTCCAACATGATTCAGATCTCTCCCAACAGTATGAACGCCAAATTACCACCACCGGTTTCACCCTGCGGTTCTCCTTCGGTGAATATCGCCGCCGCCGCCATAAATTCTTCATCTTCGTCATCCTTGCCGCTGTCGTCGCCACGGGGAATCGAGCCTTCTTCTTCTTCTTCTTCTTCTTTGGTTTCTGCTGGCAACTTGAATATCACGGTGGACAACGCATCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAAAGCCAGGCGAAGAAGGTGGTGTGTATACCTGCACCAGCAGCGGCAAATAGCAGACCAAGTAGTGGAGAGGTAGTTCCGTCTGATCTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCATACCCAAGGGGCTACTATAGATGCAGCAGCTCCAAGGGTTGTTCAGCGAGGAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGCAACGCTCTCGCCGGCTCAACCAGGTCTCAGCCTTCCAAGAACAACAACAACGCTTCCAAGAACAACAGCGTCAACAATTCTGATCAAGCTTCGACGAAGCCGAAGGAGGAAGAGGAGCAGCAGCAGCAGCAAGATCATCATCAGAGAGGGAAAAGCTCATCATCATCAGTGAAGGAGGAGATGGAGATGGAAGATATAGCAGTGATGAACCAGAATGATCAAGAGCTTGAGAAAATGATGATGATGGAAGATGATAATAATAGATCAGAAGGAGTGGGATACAAACCATGTATGTTGGAGAGTAATAATAATAATAATCAGTCTTGTGAGGATTTCTTTGCAGAACTGGGAGAGATTGAAGCTGACCCACTCAATCTCTTGTTCACTCAAGCAGGTTTCAATGAAGAGCATCAGAATCATGACCGTCAGAGAGAATCCAAAGCTTTAGATCCTTTTCATCTCTTTGACTGGTCATCATCATCATCAGCATCAGCAGATATTCACAGCACCACCACCACCTCATTTGAAGAACCAAAGAGAGGGTTATAA 1578 0.4677 MCSSIFGSIMDNNFHQGDLTDIFRASSGGGSGAGGGGRGGGSYGTSSSASELAPHDLSSTSSESWHHHHHQMNFSSVIMEDSLRATNFFGDPFSNMRDPFLQDLDFPLPSSYFSSAINNSAMEDASPGFSDSSVVLSSHHKLVEDDMRIRPPVAAAACNNNTIFSNMIQISPNSMNAKLPPPVSPCGSPSVNIAAAAINSSSSSSLPLSSPRGIEPSSSSSSSLVSAGNLNITVDNASVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNASKNNSVNNSDQASTKPKEEEEQQQQQDHHQRGKSSSSSVKEEMEMEDIAVMNQNDQELEKMMMMEDDNNRSEGVGYKPCMLESNNNNNQSCEDFFAELGEIEADPLNLLFTQAGFNEEHQNHDRQRESKALDPFHLFDWSSSSSASADIHSTTTTSFEEPKRGL 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0120 525 MobiDBLite consensus disorder prediction 41 60 - -
Prci3g0120 525 FunFam probable WRKY transcription factor 14 252 333 - -
Prci3g0120 525 MobiDBLite consensus disorder prediction 374 404 - -
Prci3g0120 525 MobiDBLite consensus disorder prediction 304 404 - -
Prci3g0120 525 MobiDBLite consensus disorder prediction 502 525 - -
Prci3g0120 525 MobiDBLite consensus disorder prediction 323 373 - -
Prci3g0120 525 SMART WRKY_cls 279 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0120 525 Gene3D WRKY domain 252 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0120 525 MobiDBLite consensus disorder prediction 29 64 - -
Prci3g0120 525 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 162 471 IPR044810 GO:0003700
Prci3g0120 525 ProSiteProfiles WRKY domain profile. 274 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0120 525 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0120 525 SUPERFAMILY WRKY DNA-binding domain 277 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0120 525 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0120 Prci-Chr3 1753566 1757307 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0120 1 474 WRKY Transcription Factor Family AT2G34830 44.025 1.10e-84 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g0120 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0120 - - pcin:129305007 896.73