LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g0119	ATGTGCAGCAGCATCTTTGGCTCAATCATGGACAACAATTTTCATCAAGGCGATTTAACTGATATATTCCGTGCAAGTAGCGGCGGTGGCAGCGGTGCCGGAGGTGGTGGCCGTGGCGGTGGTTCTTATGGCACTTCTTCTTCAGCATCTGAATTAGCTCCTCATGATCTCTCTTCTACTTCATCAGAAAGCTGGCACCACCACCACCACCAGATGAATTTCTCTTCTGTGATAATGGAAGATTCTCTCAGAGCCACCAACTTTTTTGGCGACCCGTTCTCGAACATGCGAGATCCCTTTCTTCAAGACCTTGATTTCCCCTTACCTTCTTCCTACTTCAGTTCTGCAATTAATAATTCTGCCATGGAAGATGCATCGCCTGGTTTTTCTGATTCTTCTGTTGTTTTGTCGTCTCATCACAAGCTTGTAGAAGATGATATGAGAATAAGGCCCCCTGTAGCAGCAGCAGCTTGTAACAACAACACCATATTCTCCAACATGATTCAGATCTCTCCCAACAGTATGAACGCCAAATTACCACCACCGGTTTCACCCTGCGGTTCTCCTTCGGTGAATATCGCCGCCGCCGCCATAAATTCTTCATCTTCGTCATCCTTGCCGCTGTCGTCGCCACGGGGAATCGAGCCTTCTTCTTCTTCTTCTTCTTCTTTGGTTTCTGCTGGCAACTTGAATATCACGGTGGACAACGCATCAGTGCAGATCTCGTCTCCAAGGAATCCGGGTCTCAAGCGAAGAAAAAGCCAGGCGAAGAAGGTGGTGTGTATACCTGCACCAGCAGCGGCAAATAGCAGACCAAGTAGTGGAGAGGTAGTTCCGTCTGATCTGTGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCTCCATACCCAAGGGGCTACTATAGATGCAGCAGCTCCAAGGGTTGTTCAGCGAGGAAACAAGTAGAGAGAAGCAGGACAGACCCAAACATGCTGGTCATCACTTACACTTCAGAGCACAACCATCCATGGCCGACTCAACGCAACGCTCTCGCCGGCTCAACCAGGTCTCAGCCTTCCAAGAACAACAACAACGCTTCCAAGAACAACAGCGTCAACAATTCTGATCAAGCTTCGACGAAGCCGAAGGAGGAAGAGGAGCAGCAGCAGCAGCAAGATCATCATCAGAGAGGGAAAAGCTCATCATCATCAGTGAAGGAGGAGATGGAGATGGAAGATATAGCAGTGATGAACCAGAATGATCAAGAGCTTGAGAAAATGATGATGATGGAAGATGATAATAATAGATCAGAAGGAGTGGGATACAAACCATGTTTCAATGAAGAGCATCAGAATCATGACCGTCAGAGAGAATCCAAAGCTTTAGATCCTTTTCATCTCTTTGACTGGTCATCATCATCATCAGCATCAGCAGATATTCACAGCACCACCACCACCTCATTTGAAGAACCAAAGAGAGGGTTATAA	1473	0.4732	MCSSIFGSIMDNNFHQGDLTDIFRASSGGGSGAGGGGRGGGSYGTSSSASELAPHDLSSTSSESWHHHHHQMNFSSVIMEDSLRATNFFGDPFSNMRDPFLQDLDFPLPSSYFSSAINNSAMEDASPGFSDSSVVLSSHHKLVEDDMRIRPPVAAAACNNNTIFSNMIQISPNSMNAKLPPPVSPCGSPSVNIAAAAINSSSSSSLPLSSPRGIEPSSSSSSSLVSAGNLNITVDNASVQISSPRNPGLKRRKSQAKKVVCIPAPAAANSRPSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSQPSKNNNNASKNNSVNNSDQASTKPKEEEEQQQQQDHHQRGKSSSSSVKEEMEMEDIAVMNQNDQELEKMMMMEDDNNRSEGVGYKPCFNEEHQNHDRQRESKALDPFHLFDWSSSSSASADIHSTTTTSFEEPKRGL	490

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	41	60	-	-
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	374	404	-	-
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	429	453	-	-
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	304	404	-	-
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	323	373	-	-
	Prci3g0119	490	FunFam	probable WRKY transcription factor 14	252	333	-	-
	Prci3g0119	490	SMART	WRKY_cls	279	339	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	466	490	-	-
	Prci3g0119	490	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	162	442	IPR044810	GO:0003700
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	29	64	-	-
	Prci3g0119	490	SUPERFAMILY	WRKY DNA-binding domain	277	340	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g0119	490	Gene3D	WRKY domain	252	333	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g0119	490	ProSiteProfiles	WRKY domain profile.	274	340	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g0119	490	Pfam	WRKY DNA -binding domain	281	338	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Prci3g0119	490	MobiDBLite	consensus disorder prediction	202	225	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g0119	Prci-Chr3	1753566	1757310	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g0119	1	348	WRKY Transcription Factor Family	AT2G34830	48.857	3.65e-79	252

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Prci3g0119		WRKY	2.8e-25	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g0119	-		-	pcin:129305007	808.52