Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0100 ATGTTGAGATTCATGGAACTAACAAGCCAAGACATGACCATGGAATGTTCTGTGTACCATGTATTGTACTTGGGATCGTCTGCTGCAGGTTGTGATGCTTCGCCTGTTAGATGTTTTCTCTTCTATGAAAATCCAAATTGTAGGATTGTTGGTATGGCTGGCATAGGAGAGGCATTATTGCTTGTTTCTTTATGTGGCTCTTGTACTTTTCTCACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATTGGCCGTGCCCTCGGTCCAGAAGTTGGAGTTAGCATTGGTCTTTGTTTCTTTCTAGGGAATGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCCGTAGAAACATTTTTGAAAGCAGTGCCTAAAGCTGGGATTTTTGGAGAGACTATCACACAAGTTAATGGTACTGCCGTTGCAGAACCAATACACGTTATAAGTTCTCATGATATGCAAATTTATGGAATCGTTGTGACTATTATATTATGCTTTATTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCACCTGCTTTTCTTATACCTGTTTTGTTCTCTCTGTCCTGCATATTTATGGGGATTTTCTTGGCAAGGAAGGATAAGCCTGCAGAGGGAATCACGGGATTGAGTTTGGAGACATTTAAAGAAAATTGGAATTCAGATTATCAAAAGACTGATGCCAATGGAATTCCAGATCCCAATGGATCTGTAAGCTGGGATTTCAATTCGTTGGTTGGACTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCAAATCGATCATCGTCTCTGAAAGATACTCAGCGATCAATACCTGTTGGAACCTTAGCTGCTACTCTTTCGACTTCTTCTATGTATCTGATTACTGTTTTCTTGTTTGGTTCTGTTGCTACCCGAAACAAGCTATTAACAGATAGGCTACTTACAGCTACTATTGCCTGGCCTTTTCCATCATTAATTAAAATTGGGATTATTCTTTCAACTCTGGGTGCTGCCCTTCAGAGCTTGACAGGGGCCCCACGTTTGCTTGCAGCAATAGCGAATGATGATATTTTACCTGTTCTTAACTACTTCAAAGTTGTGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACTGCTCTCCTCTGTATTGGGTGTGTCATTATTGGGAATCTGGATCTTATCACCCCAACAATAACTATGTTCTTCCTTCTCTGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGCTGGCGCCCTCGGTGGGCTTTTCACCACTGGAGCTTGTCACTTTTTGGTGCTTTACTTTGTGTAGTGATCATGTTCCTGATCTCTTGGTCATTCACGGTGGTGTCTTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGTATCAAAGGGAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAACTAGCACTTCGCAGCCTTAGGTCACTTGGAGCAAGCCAAGTTCACCCAAAAAATTGGTATCCGATCCCTTTAATATTCTGCCGGCCTTGGGGCAAACTGCCAGAAAATGTACCTTGCCATCCCAAACTAGCAGACTTCGCTAACTGCATGAAGAAAAAAGGTAGAGGAATGTCTTTATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCTGAAGATGCCAAGGTTGCTTGTAGACAATTAAGCACCTACATTGATTACAAGAATTGTGAAGGTGTTGCCGAGATAGTTGTAGCCCCCAATATGTCAGAAGGCTTTCGTGGTATTATACAGACTATGGGCCTCGGCAATCTTAAGCCGAACATTGTCGTGATGCGTTATCCAGAGATATGGCGGCGTGAGAACTTGACGGAGATCCCGGCCACCTTTGTTGGGATAATCAACGATTGCATTGTAGCAAACAAAGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTATGGCACAATTGATTTGTATTGGATTGTGAGAGACGGAGGATTAATGCTTCTTCTCTCCCAGCTTCTTCTTACGAAGAAGAGCTTTGAGAATTGCAAGATTCAAGTTTTTTGCATTGCAGAGGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTGAAGAAGTTTCTGTATGATCTTAGGATGCAAGCAGAGGTCTTTGTCATCACAATGAAATGGGATGCACAAATGGATGGTGGTGAGTCTCAGCAAGACGAATCATACGAAGCATTTACCAGCGCGCAGCAAAGAATCAGCGATTACTTAGCTGAAATGAGGGCGATGAAGCGAGATGACGCCCCTCTAATGGCTGATGGTAAGCCTGTGGTTGTGAATGAGAAGCAGGTGGAGAAGTTTCTGTACACAACAATGAAACTGAATTCTGTGATGTTGAAGTACTCAAGAATGGCAGCTGTTGTGCTGGTAAGTCTGCCTCCACCTCCATTGAACCACCCTAGTTTTTTCTATATGGAGTATATGGATCTGTTGCTGGAGAAGGTTCCGAGGATTTTGATTGTAAGAGGATACAGAAGAGATGTTGTGACTCTATTCACATAG 2610 0.4326 MLRFMELTSQDMTMECSVYHVLYLGSSAAGCDASPVRCFLFYENPNCRIVGMAGIGEALLLVSLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPKAGIFGETITQVNGTAVAEPIHVISSHDMQIYGIVVTIILCFIVFGGVKMINRVAPAFLIPVLFSLSCIFMGIFLARKDKPAEGITGLSLETFKENWNSDYQKTDANGIPDPNGSVSWDFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLSTSSMYLITVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVVDGSEPHLATLFTALLCIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWAFHHWSLSLFGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSLFVSILDGDYHECAEDAKVACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKKSFENCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITMKWDAQMDGGESQQDESYEAFTSAQQRISDYLAEMRAMKRDDAPLMADGKPVVVNEKQVEKFLYTTMKLNSVMLKYSRMAAVVLVSLPPPPLNHPSFFYMEYMDLLLEKVPRILIVRGYRRDVVTLFT 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0100 869 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Prci3g0100 869 Pfam Solute carrier family 12 670 868 IPR018491 GO:0006811|GO:0016020|GO:0022857
Prci3g0100 869 Pfam Solute carrier family 12 538 659 IPR018491 GO:0006811|GO:0016020|GO:0022857
Prci3g0100 869 Pfam Amino acid permease 49 504 IPR004841 GO:0016020|GO:0055085
Prci3g0100 869 PANTHER SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS 49 866 IPR004842 GO:0006811|GO:0015377|GO:0016020
Prci3g0100 869 Gene3D Amino acid/polyamine transporter I 44 486 - -
Prci3g0100 869 NCBIfam K-Cl cotransporter 49 869 IPR004842 GO:0006811|GO:0015377|GO:0016020
Prci3g0100 869 FunFam Cation-chloride cotransporter 1 36 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0100 Prci-Chr3 1541280 1553583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0100 49 869 Inorganic Solute Cotransporters AT1G30450 82.360 0.0 1392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0100 K14427 - gmx:100795205 1454.11