LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci3g0098	ATGGATAATGGGGATCTTGATGGCAGTGGAGAAGATGAGTTTCATGGGCAGAGAGGTCGCAAGTACCGGCCCGTGTTGGACAACGATCGTGCCGTACTTGAGATGTCTTCCATGGATCCTGGATCGTCGTCTTCTTCATATCCCAATAAACCTGCTTCTCTTAAAAAAATTAATGTAAATGCGAGTGCAAATGTGGGTTCTGATGCCAAAGAAGGGAACTCTCCTCGTCATACACAGGCTAATGGGATTCAAGGGGAATCCAAATTGGAATTGTTTGGTTTTGATTCTCTTGTCAACATTCTTGGGCTCAAAAGTATGACTGGAGAGCAGCTTCAACAGCCATCTAGTCCTAGAGATGGTGAGAATATTTCCATCACAGTTGGGCAGCCAAGGCCTGCTGGCCCCCAACTGGGAACAATGATGGGTGTATTCATTCCGTGCTTACAGAGCATATTGGGAATTATCTATTACATTCGGTTCTCTTGGATTGTTGGTATGGCTGGCATAGGAGAGGCATTATTGCTTGTTTCTTTATGTGGCTCTTGTACTTTTCTCACCTCAATATCACTGAGTGCTATTGCAACCAATGGTGCCATGAAGGGTGGGGGACCATACTATCTCATTGGCCGTGCCCTCGGTCCAGAAGTTGGAGTTAGCATTGGTCTTTGTTTCTTTCTAGGGAATGCAGTTGCTGGAGCCCTTTATGTGTTGGGAGCCGTAGAAACATTTTTGAAAGCAGTGCCTAAAGCTGGGATTTTTGGAGAGACTATCACACAAGTTAATGGTACTGCCGTTGCAGAACCAATACACGTTATAAGTTCTCATGATATGCAAATTTATGGAATCGTTGTGACTATTATATTATGCTTTATTGTATTTGGAGGTGTAAAGATGATTAATCGGGTTGCACCTGCTTTTCTTATACCTGTTTTGTTCTCTCTGTCCTGCATATTTATGGGGATTTTCTTGGCAAGGAAGGATAAGCCTGCAGAGGGAATCACGGGATTGAGTTTGGAGACATTTAAAGAAAATTGGAATTCAGATTATCAAAAGACTGATGCCAATGGAATTCCAGATCCCAATGGATCTGTAAGCTGGGATTTCAATTCGTTGGTTGGACTCTTTTTCCCAGCTGTGACAGGAATAATGGCAGGTTCAAATCGATCATCGTCTCTGAAAGATACTCAGCGATCAATACCTGTTGGAACCTTAGCTGCTACTCTTTCGACTTCTTCTATGTATCTGATTACTGTTTTCTTGTTTGGTTCTGTTGCTACCCGAAACAAGCTATTAACAGATAGGCTACTTACAGCTACTATTGCCTGGCCTTTTCCATCATTAATTAAAATTGGGATTATTCTTTCAACTCTGGGTGCTGCCCTTCAGAGCTTGACAGGGGCCCCACGTTTGCTTGCAGCAATAGCGAATGATGATATTTTACCTGTTCTTAACTACTTCAAAGTTGTGGATGGCAGTGAGCCTCACCTTGCTACACTTTTCACTGCTCTCCTCTGTATTGGGTGTGTCATTATTGGGAATCTGGATCTTATCACCCCAACAATAACTATGTTCTTCCTTCTCTGTTATGCGGGTGTCAACTTGTCCTGCTTCCTTCTGGATCTTCTAGATGCTCCTAGCTGGCGCCCTCGGTGGGCTTTTCACCACTGGAGCTTGTCACTTTTTGGTGCTTTACTTTGTGTAGTGATCATGTTCCTGATCTCTTGGTCATTCACGGTGGTGTCTTTAGCTCTTGCAAGCCTTATATACAAGTATGTCAGTATCAAAGGGAAGGCTGGGGACTGGGGAGATGGTTTTAAAAGTGCATATTTCCAACTAGCACTTCGCAGCCTTAGGTCACTTGGAGCAAGCCAAGTTCACCCAAAAAATTGGTATCCGATCCCTTTAATATTCTGCCGGCCTTGGGGCAAACTGCCAGAAAATGTACCTTGCCATCCCAAACTAGCAGACTTCGCTAACTGCATGAAGAAAAAAGGTAGAGGAATGTCTTTATTTGTCTCTATACTAGATGGTGACTACCATGAATGTGCTGAAGATGCCAAGGTTGCTTGTAGACAATTAAGCACCTACATTGATTACAAGAATTGTGAAGGTGTTGCCGAGATAGTTGTAGCCCCCAATATGTCAGAAGGCTTTCGTGGTATTATACAGACTATGGGCCTCGGCAATCTTAAGCCGAACATTGTCGTGATGCGTTATCCAGAGATATGGCGGCGTGAGAACTTGACGGAGATCCCGGCCACCTTTGTTGGGATAATCAACGATTGCATTGTAGCAAACAAAGCAGTAGTCATAGTGAAGGGTCTTGATGAGTGGCCTAATGAGTACCAGAAGCAGTATGGCACAATTGATTTGTATTGGATTGTGAGAGACGGAGGATTAATGCTTCTTCTCTCCCAGCTTCTTCTTACGAAGAAGAGCTTTGAGAATTGCAAGATTCAAGTTTTTTGCATTGCAGAGGAGGATGCAGATGCAGAGGTGCTGAAGGCTGATGTGAAGAAGTTTCTGTATGATCTTAGGATGCAAGCAGAGGTCTTTGTCATCACAATGAAATGGGATGCACAAATGGATGGTGGTGAGTCTCAGCAAGACGAATCATACGAAGCATTTACCAGCGCGCAGCAAAGAATCAGCGATTACTTAGCTGAAATGAGGGCGATGAAGCGAGATGACGCCCCTCTAATGGCTGATGGTAAGCCTGTGGTTGTGAATGAGAAGCAGGTGGAGAAGTTTCTGTACACAACAATGAAACTGAATTCTGTGATGTTGAAGTACTCAAGAATGGCAGCTGTTGTGCTGGTAAGTCTGCCTCCACCTCCATTGAACCACCCTAGTTTTTTCTATATGGAGTATATGGATCTGTTGCTGGAGAAGGTTCCGAGGATTTTGATTGTAAGAGGATACAGAAGAGATGTTGTGACTCTATTCACATAG	2952	0.4373	MDNGDLDGSGEDEFHGQRGRKYRPVLDNDRAVLEMSSMDPGSSSSSYPNKPASLKKINVNASANVGSDAKEGNSPRHTQANGIQGESKLELFGFDSLVNILGLKSMTGEQLQQPSSPRDGENISITVGQPRPAGPQLGTMMGVFIPCLQSILGIIYYIRFSWIVGMAGIGEALLLVSLCGSCTFLTSISLSAIATNGAMKGGGPYYLIGRALGPEVGVSIGLCFFLGNAVAGALYVLGAVETFLKAVPKAGIFGETITQVNGTAVAEPIHVISSHDMQIYGIVVTIILCFIVFGGVKMINRVAPAFLIPVLFSLSCIFMGIFLARKDKPAEGITGLSLETFKENWNSDYQKTDANGIPDPNGSVSWDFNSLVGLFFPAVTGIMAGSNRSSSLKDTQRSIPVGTLAATLSTSSMYLITVFLFGSVATRNKLLTDRLLTATIAWPFPSLIKIGIILSTLGAALQSLTGAPRLLAAIANDDILPVLNYFKVVDGSEPHLATLFTALLCIGCVIIGNLDLITPTITMFFLLCYAGVNLSCFLLDLLDAPSWRPRWAFHHWSLSLFGALLCVVIMFLISWSFTVVSLALASLIYKYVSIKGKAGDWGDGFKSAYFQLALRSLRSLGASQVHPKNWYPIPLIFCRPWGKLPENVPCHPKLADFANCMKKKGRGMSLFVSILDGDYHECAEDAKVACRQLSTYIDYKNCEGVAEIVVAPNMSEGFRGIIQTMGLGNLKPNIVVMRYPEIWRRENLTEIPATFVGIINDCIVANKAVVIVKGLDEWPNEYQKQYGTIDLYWIVRDGGLMLLLSQLLLTKKSFENCKIQVFCIAEEDADAEVLKADVKKFLYDLRMQAEVFVITMKWDAQMDGGESQQDESYEAFTSAQQRISDYLAEMRAMKRDDAPLMADGKPVVVNEKQVEKFLYTTMKLNSVMLKYSRMAAVVLVSLPPPPLNHPSFFYMEYMDLLLEKVPRILIVRGYRRDVVTLFT	983

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci3g0098	983	PANTHER	SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS	84	980	IPR004842	GO:0006811\|GO:0015377\|GO:0016020
	Prci3g0098	983	MobiDBLite	consensus disorder prediction	37	52	-	-
	Prci3g0098	983	FunFam	Cation-chloride cotransporter 1	136	600	-	-
	Prci3g0098	983	MobiDBLite	consensus disorder prediction	1	52	-	-
	Prci3g0098	983	Pfam	Solute carrier family 12	784	982	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Prci3g0098	983	Pfam	Solute carrier family 12	652	773	IPR018491	GO:0006811\|GO:0016020\|GO:0022857
	Prci3g0098	983	MobiDBLite	consensus disorder prediction	8	28	-	-
	Prci3g0098	983	NCBIfam	K-Cl cotransporter	74	983	IPR004842	GO:0006811\|GO:0015377\|GO:0016020
	Prci3g0098	983	Pfam	Amino acid permease	142	618	IPR004841	GO:0016020\|GO:0055085
	Prci3g0098	983	Gene3D	Amino acid/polyamine transporter I	136	600	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci3g0098	Prci-Chr3	1541280	1560307	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci3g0098	137	983	Inorganic Solute Cotransporters	AT1G30450	82.429	0.0	1443

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci3g0098	K14427		-	gmx:100795205	1644.02