Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0094 ATGAGACCCTCTTCATCTGGTTTTAGCCCTCCACCTCCGGAAGGGGAAAAGCGAGTCCTGGATTCAGAACTTTGGCATGCATGCGCTGGCCCTCTTGTCTCCTTACCAGCAGTTGGAAGTCGTGTCGTCTACTTTCCTCAAGGTCACAGTGAACAGGTTGCTGCGTCTACCAACAAGGAAGTGGACGCCCATATTCCTAATTACCCTAGCTTGCCTCCGCAGCTTATTTGTCAGCTTCATAATTTGACCATGCATGCGGATGCTGAGACAGATGAAGTATATGCGCAGATGACCTTGCAAGCTCTAAATCCTCAAGAGCAGAAAGAGGTGTACCTTCCAGCAGAGTTGGGCACTCCTAGCAAGCAGCCAACAAATTACTTTTGCAAAACTTTGACAGCCAGTGACACAAGCACACATGGGGGATTCTCTGTCCCACGTCGAGCAGCCGAGAAAGTGTTTCCACCTCTGGACTTTTCCCAACAACCTCCTTGTCAAGAGCTAATTGCTAGGGATTTGCATGGTAATGAATGGAAATTCAGACATATCTTTCGTGGTCAACCCAAAAGGCATCTGCTTACAACAGGATGGAGTGTTTTTGTGAGTGCTAAGAGGCTAATTGCCGGTGATTCAGTTCTGTTTATCTGGAATGAGAAGAATCAGTTGCTTCTTGGTATCCGGCGTGCAAATCGTCCACAAACTGTGATGCCTTCATCAGTGTTATCAAGTGATAGCATGCACTTGGGGCTTCTTGCTGCTGCAGCTCATGCAGCTGCAACAAACAGTCGTTTTACCATTTTCTATAATCCACGCGCCAGCCCATCTGAATTTGTCATACCCTTAGTCAAGTATGTTAAAGCTGTGTATCATACTCGAGTCTCAGTTGGCATGCGATTCAGGATGCTGTTTGAAACGGAGGAATCAAGTGTTCGGAGATACATGGGCACCATAACTGGTATTAGTGACCTAGATCCTGTTCGTTGGCCAAATTCACATTGGCGTTCAGTCAAGGTTGGCTGGGATGAATCTACAGCAGGAGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCATTAACAACATTTCCGATGTATCCATCATCTTTTCCTCTTAGGCTTAAACGACCATGGCCTCCAGGGTTGCCTTCTTTCCAGGGCATGAAGGATGACAGTTTTGGCTTAAGTAATCAACTATTATGGCTTCGAGACAGCACAGACAGAGGACTTCAGTCTCTTAATTTCCAGGGGTTTGGGTACAATCCTTGGATGCAGCCAAGGCTTGACCCCTCCATGTTGACTTCGCCAGCTGACATGTACCAAGCTATGGCTAATACTGTTGTTCAGGATATGAGGACTTTGGATCCTTCCAAACAGCATCCTGCATCTTTTCTTCAATTTCAGCAGCCACAGAACTTCCCCAATAGGACTGCTGTTTTAATGCACGCCCAAATGTCCCAGCAGTCTCAACTGCAGCAGGCTTGTCAAAGCAATCAAGAGAATCAGAATTCTTCTCAATCCTTGGCTCCAACTCAGATGCAACTTCAGCATCAGCACTCGTTCAGTAATCAGCATCAGCAGTCACAGCAAGTGATTGATCATCAGCAGATTTCAAGTGCTTCTCCAATGCCTCAGTTTGCATCTAATCCTCAACCCCATTCACCACCCATGCAAGCTATGTCTTCACTTTGTCAACAGCAAAACTTTTCTGATTCAAATGTGAATTCCATGAATGCTGCTGGAGTTTCCCCCTTGCACAGTATCTTGGGTTCATTTTCCCAAGACGAATCATCCCACCTTCTCAACCTACCTAGGACTAGCTCTTGGATACCTGTTCAAACATCTGCTGCCTGGCCCTCCAAGCGTGTTGCAGTGGATCCTCTTCTTTCTTCTGGAGCTTCTCAGTGTACTCTGCCTCAGTTGGAGTTGTTAGGGCAGCCACAAAGTACTGTGTCACAGAATGTCATATCGTTGCCACCCTTTCCTGGTCGGGAGTGTTCAATAGACCAAGAAGGGAGCACTGATCCTCAGAACAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCTCTTATAGTGCAGAATGGGATGCCGAGCCTCAAGGGAGTTGGCAACAACAATGACTCTGGGATTGGGCCATTTCAGTCATCTAATTTCCTGGATGCTACAGGAACTGATTCTTCATTGAATCATGGAATGACACATAGTATTGCTGAATCGAACTTCCTTGAGATTCCAGATAATGGGGGTCAAGGAAACCCACAAAATAAAACCTTTGTTAAGGTTTACAAGTCAGGGTCCTGTGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACCATGAGCTGCGGAGTGAACTTGCTCGAATGTTTGGCCTTGAAGGCGAGTTAGAGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTTGACCGAGAGAATGACGTTCTTCTCATTGGTGATGGTCCCTGGCCGGAATTCGTAAATAGTGTGTGGTGTATCAAAATACTTTCTCCTCAAGAAGTGCAGCAAATGGGAAACAATGGGCTCGAGCTTCTGAACTCGGTCCCAATTCAGAGGCTGTCTAATGGTGTCTGTGATGACTATGTGAGTCGTCCTGACCCGAGAAATTTAAGCACTGGGATAGCAACCAATGGTGTGACAATCTAG 2670 0.4625 MRPSSSGFSPPPPEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNLTMHADAETDEVYAQMTLQALNPQEQKEVYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSSFPLRLKRPWPPGLPSFQGMKDDSFGLSNQLLWLRDSTDRGLQSLNFQGFGYNPWMQPRLDPSMLTSPADMYQAMANTVVQDMRTLDPSKQHPASFLQFQQPQNFPNRTAVLMHAQMSQQSQLQQACQSNQENQNSSQSLAPTQMQLQHQHSFSNQHQQSQQVIDHQQISSASPMPQFASNPQPHSPPMQAMSSLCQQQNFSDSNVNSMNAAGVSPLHSILGSFSQDESSHLLNLPRTSSWIPVQTSAAWPSKRVAVDPLLSSGASQCTLPQLELLGQPQSTVSQNVISLPPFPGRECSIDQEGSTDPQNNLLFGVNIEPSSLIVQNGMPSLKGVGNNNDSGIGPFQSSNFLDATGTDSSLNHGMTHSIAESNFLEIPDNGGQGNPQNKTFVKVYKSGSCGRSLDITKFSSYHELRSELARMFGLEGELEEDPVRSGWQLVFVDRENDVLLIGDGPWPEFVNSVWCIKILSPQEVQQMGNNGLELLNSVPIQRLSNGVCDDYVSRPDPRNLSTGIATNGVTI 889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0094 889 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 846 IPR044835 GO:0003677|GO:0006355|GO:0009725
Prci3g0094 889 Gene3D - 291 363 - -
Prci3g0094 889 Gene3D - 752 846 - -
Prci3g0094 889 FunFam Auxin response factor 125 229 - -
Prci3g0094 889 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Prci3g0094 889 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Prci3g0094 889 SUPERFAMILY CAD & PB1 domains 753 832 - -
Prci3g0094 889 SMART B3_2 127 229 IPR003340 GO:0003677
Prci3g0094 889 FunFam Auxin response factor 291 363 - -
Prci3g0094 889 Pfam AUX/IAA family 752 842 IPR033389 -
Prci3g0094 889 Pfam Auxin response factor 253 336 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Prci3g0094 889 ProSiteProfiles PB1 domain profile. 756 841 IPR000270 GO:0005515
Prci3g0094 889 Gene3D - 125 228 IPR015300 -
Prci3g0094 889 MobiDBLite consensus disorder prediction 489 562 - -
Prci3g0094 889 SUPERFAMILY DNA-binding pseudobarrel domain 112 256 IPR015300 -
Prci3g0094 889 FunFam Auxin response factor 751 846 - -
Prci3g0094 889 CDD B3_DNA 126 227 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0094 Prci-Chr3 1414178 1420906 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0094 756 849 B3 DNA Binding Superfamily AT1G19220 61.702 2.64e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Prci3g0094 AUX_IAA 5.4e-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0094 - - gmx:100798719 1450.26