Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0005 ATGACTTCTGCAGGTGTTGAGTACCGTTGCTTTATCGGTGGACTTGCTTGGACTATTGACAACGATGCCCTCGGTGAGGCCTTTGCTCCTTTTGGTGACATTATCGAATCGAAGGTTGTCAATGATTGCGAGACCAGAAGGACAAGATGGTTCGGATTCGTGACGTTCTCCTCAGAGCAGTCCATGAGAGATGCGATTGACGGCATGAACGGTCAGAATCTTGATGGCCGGAACATTACACTGAACGAAGCTCAGTCTCGTGGCAGAGGAGGCAGCAGCGGGAGTGGGTACGGCGGCGGGCGTGGTTACAGCCGTGGTGGAGGCGGATAA 330 0.5333 MTSAGVEYRCFIGGLAWTIDNDALGEAFAPFGDIIESKVVNDCETRRTRWFGFVTFSSEQSMRDAIDGMNGQNLDGRNITLNEAQSRGRGGSSGSGYGGGRGYSRGGGG 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0005 109 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 8 86 IPR000504 GO:0003723
Prci3g0005 109 PANTHER GEO13361P1-RELATED 7 93 - -
Prci3g0005 109 MobiDBLite consensus disorder prediction 69 109 - -
Prci3g0005 109 SMART rrm1_1 9 82 IPR000504 GO:0003723
Prci3g0005 109 MobiDBLite consensus disorder prediction 69 92 - -
Prci3g0005 109 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 11 79 IPR000504 GO:0003723
Prci3g0005 109 Gene3D - 3 109 IPR012677 -
Prci3g0005 109 SUPERFAMILY RNA-binding domain, RBD 9 109 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0005 Prci-Chr3 167114 173803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0005 11 79 Eukaryotic Initiation Factors Gene Family AT1G22760 42.029 1.02e-10 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0005 - K13195 pcin:129304649 178.333