Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci398g0006 ATGGCGATTCCAGTAGCCTCATCATCATCATCCTTCAGCTTCAACAGTGGAACCAGGTATAGATATGATGCTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGAGATTCTCTACGACGCTTTGCGCCGTAAGGGAATCAACGCCTTCATTGACGACAAGAGACTTGGCAAAGGGGAAGAGATCTCTCCTACGCTTCTCAAAGCCATAGAGAGATCCAGGATTTCCATTATTGTCTTCTCTACCAACTACGCTACTTCCACATGGTGCCTCGAAGAACTCGCCCACATCGTTTGGTGTAGGAAGCAGAAGAAGCAGGTGGTGATGCCCATCTTTTACAAGGTAGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGCGATGACTTAGAGAAAGTGCGAAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGCTTGTCACCAGCATGGCTTTTTCAAGATGGATATGATCAGTTTGGGTTTATTGAAAACATTGTCCAAGGTGCATTTGTTACGCTGCCCCCTAAACGCTTTCAAAACACTGATTACACGGTTGGACTTGAGCCTCACATAGAAGAAGTGGTGTCACTTTTAGATAAATCTGATCATCGCGTTTGCATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACTCTTGCAAAAGCTATCTACAATTCAATCTTCTACAAATTTGAAGGTTCGTGCTTTTTATTTGATATCAGAGAAGAATCAAACAAATTCCAAGGCATTGTTCGTCTTCAACAGACACTTCTATCAGAAATTCTTGAGGAAAAGAGGATGACATTTAGTAGTGTTTATGAAGGAATATCCAGAATAAAACACAGACTTTCTCATAAACAAGTTTTGTTGGTTCTTGATGATGTTGATCACGATGAACAATTAGAACAACTTGCAGGAGGGTGTGATTGGTTTGGCAATGGAAGCAAGGTCATTATTACAACAAGAAATAAGCAATTGCTAATTTCTCATAATATTGAACAGACATATGAAATGAAGGAGCTAAACAAGCATGCCTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATGAGAGCCAACCTCCAAAAGGCTATCAAGATATGTCCAATTGTGTTGTGACCTATGTACAAGGTCTTCCTCTGGCTTTAAGATTAATAGGCTCCAATTTGGCACATAAAAGCTTAGAGGAATGGAGAACTACATTAAAACGATATGATCTGATCCCGAAAAAAACAATTCACGAGGTACTAAAGATAAGCTATGATTGCTTACAAGATGATGCTAAACGTATCTTTTTAGATATTGCTTGCTTTTTTAAAAAGGAGAAATTGGAATTCATCGAAGAAATACTACAAGCTTGTGATTATGGAGCAAGGTTTTATATCGAAGTTCTTGTTGAAAAGTCTCTAATAACTATCAATGATGAGAATGGTCGCTTGTATATGCATGATCTCATACAACAAATGGGAAGAGAGATTGTTCGGCGAGAGGCACCATCAGATATTGGTAAACGTAGTAGATTATGGTATTATAAAGATGTACTGAAAGCATTGTGTGAAAATTTAGGAAGCAACAAGATTGAAGGAATGATGCTTGATCCACCTCAACAACAAGGAGTGGAGTGGAGTGGCTTAGCCTTTGAGAAGATGAATAATCTTAAAATTCTTATTGTTCGAAATGCCCAATTCTCAACCAGTCCTAGATATTTCCCCAATAGCCTAAGATTACTTGATTGGGAGGGATATCCTTCGATGACCTTGCCACCAGATTTTTCTCCAGCAAAACTAGTTTGTTTCAAGTTGTATAGAAGTCTTTTCAGCTTGGAAGAACCATTCAAGAAGTTTGAACATGTGACACATATGGATTTCTCACATTGTGAATTCATAGCTGAAGTACCTGATATGTCTCAATTCCAAAGCTTAAGAAGATTGTTGTTTCAAGGGTGCCGCAATCTGATCAAAGTTCATGATTCAGTGGGATCTCTCTCTAGGTTGGTCCGATTAGATGTCAGTGAATGCACCAAACTTACAATCTTTCCACATGAAATCAACATGCCATCTCTTCAAGAGCTCAATCTCAGAGAATGCAAGAGTCTTGACTACTTCCCAAATATATTGGGAAAGATGGATTCACTAACTGATATTTTTGCAAGTGAAACTGCTATTATAGAGCTCCCACCTTCCATTGGATATCTTCCAGCTCTAGAAAGTTTGTTTATAAGGTCCTGCAAAAGTCTTAGGGAGCTTCCAAACAGCTTGTTGATGTTGCAAAATCTTAGCACGCTTGATTTGGGAGATATTCAACCTCATGGAAGGAAATCATTGAAGAGATTAATGCAAGAGAGCCGACCAGCTATTAGCTACACAAACTTAGAGTACTTGGATCTTGAGAATTGTGGTCTATTGGATGAAGATCTTTGCCTAACCCTGAATTGTTTTCAGAATGTGCAAGAGTTAAATCTGTCAAGGAATGATTTTGTGTCCCTTCCTGAGTGCATTAAAGAGTGTGCTAATCTGATAAAACTAGATGTGACTAATTGCAAGAGGCTAAGAGACATACCAGAGCTGCCATCAAAGTTGAAGGACATAAGGGCAGAGAATTGCACATCATTAACTATGGAGTCACTAGGGCATCTATGGTCTCAGGTGAAAAATTGCTTTTGCTTGGGAATCGGTTCACCAGCAACAACATTTCCTGATTGGTTCGACCATTGCTGCAAAGGAGGGATACTGTCTTTTGGTGTTCATGGGAAAATTTTCCCTCGCGTTGTCATTGCAATTAAGTCCTGGAAATCCAACACAAGGAAGAGACACTTCTTCCAAGTTTTTATGAGAATCAATGGTCGTAAAATGCCATGGATACAAAGTGATGCTGCTGATGCAAGTGAAGAAGGTCGTGTGTTTGTTTTCTTTGGTAAACCGGGCCATGTGTTTTTATTTGATCTGCTTAAGGATTTTAGGGAAGAAGAGTTGGAGAGGCTTAATAAGTTTCTAAAATTGGATTGGAATGATGTGGAGATACAAGTAACCTGTCTCCCACATGATATCGCCGTAGTTAAGTGTGGAATTTATGTGGACAAGCAACAAACGAACATGGAGAATGTCCAGTTCAAGTCTCCAGTGATATCAAGAACTTCACTAAAACGCAGGGCAATAGCTTCTCCTCCTAATAAACCACCCAAGAAGCTCTTGAGAAAGTTCAAGGCTACTGATGAAAGAAAACTCAATAACACAAAGAAAGGGACAAGGAGAAGTAAACCACTCCAAAATTTTCACTCATGGTACAAGAAAAAGGTATTTTTTCTGATGGGTAAGCATCTTTGGAGATTCTTGTATTATTAG 3390 0.395 MAIPVASSSSSFSFNSGTRYRYDAFLSFRGEDTRHSFTEILYDALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLEELAHIVWCRKQKKQVVMPIFYKVDPLDVQYQRNSFEEAMAALEDRFSDDLEKVRKWRSALSEAASLSPAWLFQDGYDQFGFIENIVQGAFVTLPPKRFQNTDYTVGLEPHIEEVVSLLDKSDHRVCMLGIHGTGGIGKTTLAKAIYNSIFYKFEGSCFLFDIREESNKFQGIVRLQQTLLSEILEEKRMTFSSVYEGISRIKHRLSHKQVLLVLDDVDHDEQLEQLAGGCDWFGNGSKVIITTRNKQLLISHNIEQTYEMKELNKHASLELFCWHAFHESQPPKGYQDMSNCVVTYVQGLPLALRLIGSNLAHKSLEEWRTTLKRYDLIPKKTIHEVLKISYDCLQDDAKRIFLDIACFFKKEKLEFIEEILQACDYGARFYIEVLVEKSLITINDENGRLYMHDLIQQMGREIVRREAPSDIGKRSRLWYYKDVLKALCENLGSNKIEGMMLDPPQQQGVEWSGLAFEKMNNLKILIVRNAQFSTSPRYFPNSLRLLDWEGYPSMTLPPDFSPAKLVCFKLYRSLFSLEEPFKKFEHVTHMDFSHCEFIAEVPDMSQFQSLRRLLFQGCRNLIKVHDSVGSLSRLVRLDVSECTKLTIFPHEINMPSLQELNLRECKSLDYFPNILGKMDSLTDIFASETAIIELPPSIGYLPALESLFIRSCKSLRELPNSLLMLQNLSTLDLGDIQPHGRKSLKRLMQESRPAISYTNLEYLDLENCGLLDEDLCLTLNCFQNVQELNLSRNDFVSLPECIKECANLIKLDVTNCKRLRDIPELPSKLKDIRAENCTSLTMESLGHLWSQVKNCFCLGIGSPATTFPDWFDHCCKGGILSFGVHGKIFPRVVIAIKSWKSNTRKRHFFQVFMRINGRKMPWIQSDAADASEEGRVFVFFGKPGHVFLFDLLKDFREEELERLNKFLKLDWNDVEIQVTCLPHDIAVVKCGIYVDKQQTNMENVQFKSPVISRTSLKRRAIASPPNKPPKKLLRKFKATDERKLNNTKKGTRRSKPLQNFHSWYKKKVFFLMGKHLWRFLYY 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci398g0006 1129 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 807 IPR044974 GO:0006952
Prci398g0006 1129 SMART till_3 21 161 IPR000157 GO:0007165
Prci398g0006 1129 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 187 - -
Prci398g0006 1129 SUPERFAMILY L domain-like 512 896 - -
Prci398g0006 1129 Pfam NB-ARC domain 203 420 IPR002182 GO:0043531
Prci398g0006 1129 Gene3D - 16 189 IPR035897 -
Prci398g0006 1129 Gene3D - 190 352 IPR027417 -
Prci398g0006 1129 Pfam TIR domain 22 183 IPR000157 GO:0007165
Prci398g0006 1129 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 451 IPR027417 -
Prci398g0006 1129 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Prci398g0006 1129 PRINTS Disease resistance protein signature 299 313 - -
Prci398g0006 1129 PRINTS Disease resistance protein signature 222 237 - -
Prci398g0006 1129 PRINTS Disease resistance protein signature 392 406 - -
Prci398g0006 1129 PRINTS Disease resistance protein signature 699 715 - -
Prci398g0006 1129 Gene3D - 357 441 IPR042197 -
Prci398g0006 1129 Gene3D Ribonuclease Inhibitor 717 908 IPR032675 -
Prci398g0006 1129 Gene3D Ribonuclease Inhibitor 531 716 IPR032675 -
Prci398g0006 1129 ProSiteProfiles TIR domain profile. 20 188 IPR000157 GO:0007165
Prci398g0006 1129 SUPERFAMILY "Winged helix" DNA-binding domain 428 534 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci398g0006 22 812 WRKY Transcription Factor Family AT4G12020 30.086 2.23e-81 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci398g0006 - - pcin:129284776 1497.26