Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci398g0001 ATGGCGATTCCAGTAGCCTCATCATCATCATCCTTCAGCTTCAACAGTGGAACCAGGTATAGATATGATGCTTTTCTGAGTTTCAGAGGCGAAGATACTCGCCACTCCTTCACTGAGATTCTCTACGACGCTTTGCGCCGTAAGGGAATCAACGCCTTCATTGACGACAAGAGACTTGGCAAAGGGGAAGAGATCTCTCCTACGCTTCTCAAAGCCATAGAGAGATCCAGGATTTCCATTATTGTCTTCTCTACCAACTACGCTACTTCCACATGGTGCCTCGAAGAACTCGCCCACATCGTTTGGTGTAGGAAGCAGAAGAAGCAGGTGGTGATGCCCATCTTTTACAAGGTAGATCCGTTGGATGTTCAGTATCAGAGAAATAGCTTTGAGGAAGCCATGGCTGCTCTTGAAGATAGGTTCAGCGATGACTTAGAGAAAGTGCGAAAATGGAGGTCTGCTTTGTCTGAAGCTGCTAGCTTGTCACCAGCATGGCTTTTTCAAGATGGATATGATCAGTTTGGGTTTATTGAAAACATTGTCCAAGGTGCATTTGTTACGCTGCCCCCTAAACGCTTTCAAAACACTGATTACACGGTTGGACTTGAGCCTCACATAGAAGAAGTGGTGTCACTTTTAGATAAATCTGATCATCGCGTTTGCATGTTGGGGATTCATGGAACTGGTGGAATTGGCAAAACAACTCTTGCAAAAGCTATCTACAATTCAATCTTCTACAAATTTGAAGGTTCGTGCTTTTTATTTGATATCAGAGAAGAATCAAACAAATTCCAAGGCATTGTTCGTCTTCAACAGACACTTCTATCAGAAATTCTTGAGGAAAAGATGACATTTAGTAGTGTTTATGAAGGAATATCCAGAATAAAACACAGACTTTCTCATAAACAAGTTTTGTTGGTTCTTGATGATGTTGATCACGATGAACAATTAGAACAACTTGCAGGAGGGTGTGATTGGTTTGGCAATGGAAGCAAGGTCATTATTACAACAAGAAATAAGCAATTGCTAATTTCTCATAATATTGAACAGACATATGAAATGAAGGAGCTAAACAAGCATGCCTCTCTTGAACTCTTTTGTTGGCATGCCTTTCATGAGAGCCAACCTCCAAAAGGCTATCAAGATATGTCCAATTGTGTTGTGACCTATGTACAAGGTCTTCCTCTGGCTTTAAGATTAATAGGCTCCAATTTGGCACATAAAAGCTTAGAGGAATGGAGAACTACATTAAAACGATATGATCTGATCCCGAAAAAAAAAATTCACGAGGTACTAAAGATAAGCTATGATTGCTTACAAGATGATGCTAAACGTATCTTTTTAGATATTGCTTGCTTTTTTAAAAAGGAGAAATTGGAATTCATCGAAGAAATACTACAAGCTTGTGATTATGGAGCAAGGTTTTATATCGAAGTTCTTGTTGAAAAGTCTCTAATAACTATCAATGATGAGAATGGTCGCTTGTATATGCATGATCTCATACAACAAATGGGAAGAGAGATTGTTCGGCGAGAGGCACCATCAGATATTGGTAAACGTAGTAGATTATGGTATTATAAAGATGTACTGAAAGCATTGTGTGAAAATTTAGGAAGCAACAAGATTGAAGGAATGATGCTTGATCCACCTCAACAACAAGGAGTGGAGTGGAGTGGCTTAGCCTTTGAGAAGATGAATAATCTTAAAATTCTTATTGTTCGAAATGCCCAATTCTCAACCAGTCCTAGATATTTCCCCAATAGCCTAAGATTACTTGATTGGGAGGGATATCCTTCGATGACCTTGCCACCAGATTTTTCTCCAGCAAAACTAGTTTGTTTCAAGTTGTATAGAAGTCTTTTCAGCTTGGAAGAACCATTCAAGAAGTTTGAACATGTGACACATATGGATTTCTCACATTGTGAATTCATAGCTGAAGTACCTGATATGTCT 1953 0.3927 MAIPVASSSSSFSFNSGTRYRYDAFLSFRGEDTRHSFTEILYDALRRKGINAFIDDKRLGKGEEISPTLLKAIERSRISIIVFSTNYATSTWCLEELAHIVWCRKQKKQVVMPIFYKVDPLDVQYQRNSFEEAMAALEDRFSDDLEKVRKWRSALSEAASLSPAWLFQDGYDQFGFIENIVQGAFVTLPPKRFQNTDYTVGLEPHIEEVVSLLDKSDHRVCMLGIHGTGGIGKTTLAKAIYNSIFYKFEGSCFLFDIREESNKFQGIVRLQQTLLSEILEEKMTFSSVYEGISRIKHRLSHKQVLLVLDDVDHDEQLEQLAGGCDWFGNGSKVIITTRNKQLLISHNIEQTYEMKELNKHASLELFCWHAFHESQPPKGYQDMSNCVVTYVQGLPLALRLIGSNLAHKSLEEWRTTLKRYDLIPKKKIHEVLKISYDCLQDDAKRIFLDIACFFKKEKLEFIEEILQACDYGARFYIEVLVEKSLITINDENGRLYMHDLIQQMGREIVRREAPSDIGKRSRLWYYKDVLKALCENLGSNKIEGMMLDPPQQQGVEWSGLAFEKMNNLKILIVRNAQFSTSPRYFPNSLRLLDWEGYPSMTLPPDFSPAKLVCFKLYRSLFSLEEPFKKFEHVTHMDFSHCEFIAEVPDMS 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci398g0001 651 SMART till_3 21 161 IPR000157 GO:0007165
Prci398g0001 651 Gene3D - 356 440 IPR042197 -
Prci398g0001 651 SUPERFAMILY "Winged helix" DNA-binding domain 426 533 IPR036390 -
Prci398g0001 651 FunFam Disease resistance protein (TIR-NBS-LRR class) 18 187 - -
Prci398g0001 651 Gene3D - 190 351 IPR027417 -
Prci398g0001 651 Pfam NB-ARC domain 203 420 IPR002182 GO:0043531
Prci398g0001 651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 450 IPR027417 -
Prci398g0001 651 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 161 IPR035897 -
Prci398g0001 651 Gene3D - 16 189 IPR035897 -
Prci398g0001 651 Pfam TIR domain 22 183 IPR000157 GO:0007165
Prci398g0001 651 Gene3D Ribonuclease Inhibitor 529 651 IPR032675 -
Prci398g0001 651 PRINTS Disease resistance protein signature 391 405 - -
Prci398g0001 651 PRINTS Disease resistance protein signature 298 312 - -
Prci398g0001 651 PRINTS Disease resistance protein signature 628 644 - -
Prci398g0001 651 PRINTS Disease resistance protein signature 222 237 - -
Prci398g0001 651 SUPERFAMILY L domain-like 511 649 - -
Prci398g0001 651 ProSiteProfiles TIR domain profile. 20 188 IPR000157 GO:0007165
Prci398g0001 651 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 651 IPR044974 GO:0006952
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci398g0001 22 651 WRKY Transcription Factor Family AT4G12020 29.493 7.74e-65 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci398g0001 - - pcin:129296950 1269.99