Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci396g0008 ATGGGACATAAAAAGCGAAACCCTGCCCCGCGTTCCAAACAATCGGCGGCGGCTTCTCCGGTGACACAATCTGCCATCGGCGGAGCCGCCAATGGCCCTGCCTCAGCCGAGTCCGAGTTGTGCAGGAGTTCTAATCACACTATTCAAAGCACGAGTAAGATCGAGCTGCCTCCTCACCCCGAGCCGTCGGCCTACTCCACTATCAAGCTTGAATGTGAACGAGCCCTCAATGCGCTCAGGCGTGGCAACCACACAAAGGCACTGAGGCTTATGAAGGAGTTATGCTCCAGACACGAGAGCTCCGCTTACTCGGCCTTGATTCACCGAGTTCAAGGTACCATCTGTGTCAAAGTGGCCTCAATTATTGATGATCCAAGTGCGAAGCAAAGACATTTGAAGCATGCTATTGAGTCTGCCCGAAAAGCCGCGGAGCAATCGCCCAGTTCTATTGAGTTCGCACATTTTTATGCAAATTTGTTATACGAGGCAGCGAATGATTCGACTGAATACGAGCAGGTGGTGAAGGAGTGTGAAAAAGCACTCGGGATTTCAAATCCAATTGATCCTGCGAAGGAGAGCTTGCAGGACGAGAGCCAGCAGAAAATATCAACTGCAGACGCCCGGATAGTACATGTTCAGAATGAGTTGCGGCAGCTAATTCAGAAGTCAAACATAGCTTCCTTGTCAACGTGGATGAAGAATCTTGGTAATGGGGAGGAGAAATTCCGTTTGATTCCGATAAGGAGGGCTACAGAGGACCCAATGGAGGTGAGGTTAGTTCAAGCTAGAAGGCCAAATGAGATAAAAAAGGTGACCAAGACACCTGAGGAGAGAAGAAAAGAAATTGAAGTTCGAGTGGCTGCTGCAAGGCTGCTGCAGCAAAAGTCAGAGTCACCCCAATCCCAGAACGAAGGGGACAGGGATGACAGGACATTGGATTCATCTTCAGGATCTGGGCAGAGGATAAGTGAGAGGCGGAAGTATGGACATGTCCGAAAAGCTGGCTCTACATCTGAAAGGAGAGATTGGGTACGTTTATATTGGAATTCGATGAGTATTGATTTGAAGAAGGAGTTTCTTAGGATTAGGATATGTGATCTCAAATCTCACTTTGGCTCTTCAAAGGATACTTTGCTGAATGACATAGTAGCAGAAGCTTTGTCGTATGCTGAGGCTAACAAAACGTGGAAATTCTGGCTTTGCTGCCGCTGTAGTGAGAAGTTTTCAGATTCAGAATCTCACATGCAGCATGTTGTGCAGGAACACCTGGGGAATCTCTTACCTAAAATGCAGAGACTTTTACCTCAAAATGTAGACAATGAATGGATTGAGATGATTCTTAGCTGTTCTTGGAAAGCTCTGGATGCCTCTGCTGCAGTCAAAATGCTTGAAAATCAAGCAAAATGCAAAGATTTTTCGTTTCCTGAGGATACCTATATTGATCATACTGAGGAGCACCATTATTGCTTTAAAGACGCTAATAATTCTTTACCTGAAAGGGGACATAGCCTTGCTACCTGTGCACCAAATATAAGTAATCATTGTAAATCTGAGGAAACTAATATTACAGAAGGTGTTGAAGTTGAACGGTCTGTAGCATATTCCCTTGCAGATGGTTGGCCATTGTCAGATGACTCTGAGCGTGCAAAACTTCTTGAGAAAATTCGTGCAGTTTTTGATATGCTTATTAGACACAAATGTCTTGCTGCTAGTCATCTTAGCAAGGTCATACAATTTGCCATGGATGAGATTCATGGACTTGCTGCTGGGTCTCAGCTTCTAAACCATGGTTTAGACCAGTCACCAACGTGCATATGCTTTTTAGGAGCCCATCAACTTAAGAAAATTCTCAAATTTTTGCAGGAACTATCACATACTTGTGGTTTGGGTAGATATGCTGATAAAAGTACTAGTCCCATGGATGATTTACACAATTCAAATCAAATTCCTGAGATTAAAGAGAAGATTGTTCTCAATGGAGATGCATCATGCCTTCTTCTAGATGAATGTTTAGTGCCTGCAGAAATCACTCCAGGTGCTACTAAGAGTGCTGCATTGGATGATGTAATTACCCCAACTTCTAATGACGTAGTTTTACATAACACCGGTCCTTTCCTATCTTGGATATTTTCAGGTTCATCTTGTGGAGATCAATTGACCTCATGGATGAGAACAAAAGAAGATAAAAGAAATCAAGGAATGGAACTTCTCCAGACTCTTGAGAAGGAGTTTTATCACCTACAGAGCCTCTCTGAGAAGAAATGTGAGCGCTTGAATTATGAGGAAGCACTGCAGGTAGTAGAGGACCTTTGTCTAGAAGAAGGTAAGAAGAGGGAAAATTTCACTGAATTTGTTCAGCAAAACTATGGATCTGTTCTCAGAAACCGGAGAGAAGAGCTCATTGAGAGTGAGAATGATGTCATGTATGTTAGCAATAGATTTGAGTTGGATGCTATAACAAATGTACTGCAAGAAGCAGAGGCAATGAATGTTAATCAATTTGGTTATGGGGAAAATTATACTGGTGGATGTGACGTGGAATCAGGTGAAGATGATGAATGGAGAACAAAACAAATGGATAGCTACATAGAAATAGCCATTCAGAAACTGAAGGAAAACCTATCTGTGGAGCTTAGCAAAATTGATGGACGGATCATGAGAAATGTTACAGAGATGCAGCAGTTGGAGCTCAAGCTTGAGCCTGTTTCTGCTTTTGATTATCGTGCAATATTACTGCCTCTAGTGAAGTCATACCTAAGGGCACGTTTGGAAGATTTGGCTGAGAAGGATGCGACGGAGAAGTCTGATGCTGCAAGGGAAGCATTTTTGGCCGAGCTTGCTCTTGATTCAAAGAAGGGTGTCAAGGGGGGAAGTGATGGTGCAAAACATATGGAGAAAACGAAAGATAAGAAAAAAAATAAAGAGAACAGGAAAACAAGGGATTTGAAGGCTACATATGGTCATGAGCAGCTCATTCTGGACACTGCTACTCCCGATTCTTATTCTGCTGCGCCTGATAATGACCATGATTCCATTCTTGTTTCTACAATTAGTGCTGACTTGGAACAACTGGAAGAGGAAGTGAGACGTAAAATTGAGTTAGAAGAAGAGGAAAAAAAACTTGAAGAAACTTTGGAGTTACAACGACGAATAGAAAATGAGGCTAAACTGAAGCACCTCGCTGAGCAGCAAAAGAAATCTTCTGTGACGTATTTGGAGAAGTCAGCTGACAAATTTCTGGATTGTCAGTTAAGGGCTGTTGCTGATGGTCCAGAAGTTCATGAACATATGAGACCGCCTATGCTGGAGCAGTTGCCAAATATTAATGGTTACCCTAGCAATTCAGATGGTGTGCATATTGCCACATCAAATGGTTCTGCGGTACCAGACATATCTTTACTCGATTCAGTTAATCAAACTATTCATCATAAGCATCCAACAAATATCAAACAAGATCTGTCTTGCAAAATAGCTCCTGAAAATGATTTTCAGCTGGCTGAGCAGCGGACAGGTAAAAAGGGTAAACGGCATAAAAATTCTTCCAGATTGGTTGTTGGAAAGTTTGAGGCTGTCTCATTGGATAAAGAGAACACTGATGCATATACCGACAATCAGTCAAGAGAGCAGGTTAAATTCCACAACAATCAGGATGCTAACAACGGTTAG 3666 0.4277 MGHKKRNPAPRSKQSAAASPVTQSAIGGAANGPASAESELCRSSNHTIQSTSKIELPPHPEPSAYSTIKLECERALNALRRGNHTKALRLMKELCSRHESSAYSALIHRVQGTICVKVASIIDDPSAKQRHLKHAIESARKAAEQSPSSIEFAHFYANLLYEAANDSTEYEQVVKECEKALGISNPIDPAKESLQDESQQKISTADARIVHVQNELRQLIQKSNIASLSTWMKNLGNGEEKFRLIPIRRATEDPMEVRLVQARRPNEIKKVTKTPEERRKEIEVRVAAARLLQQKSESPQSQNEGDRDDRTLDSSSGSGQRISERRKYGHVRKAGSTSERRDWVRLYWNSMSIDLKKEFLRIRICDLKSHFGSSKDTLLNDIVAEALSYAEANKTWKFWLCCRCSEKFSDSESHMQHVVQEHLGNLLPKMQRLLPQNVDNEWIEMILSCSWKALDASAAVKMLENQAKCKDFSFPEDTYIDHTEEHHYCFKDANNSLPERGHSLATCAPNISNHCKSEETNITEGVEVERSVAYSLADGWPLSDDSERAKLLEKIRAVFDMLIRHKCLAASHLSKVIQFAMDEIHGLAAGSQLLNHGLDQSPTCICFLGAHQLKKILKFLQELSHTCGLGRYADKSTSPMDDLHNSNQIPEIKEKIVLNGDASCLLLDECLVPAEITPGATKSAALDDVITPTSNDVVLHNTGPFLSWIFSGSSCGDQLTSWMRTKEDKRNQGMELLQTLEKEFYHLQSLSEKKCERLNYEEALQVVEDLCLEEGKKRENFTEFVQQNYGSVLRNRREELIESENDVMYVSNRFELDAITNVLQEAEAMNVNQFGYGENYTGGCDVESGEDDEWRTKQMDSYIEIAIQKLKENLSVELSKIDGRIMRNVTEMQQLELKLEPVSAFDYRAILLPLVKSYLRARLEDLAEKDATEKSDAAREAFLAELALDSKKGVKGGSDGAKHMEKTKDKKKNKENRKTRDLKATYGHEQLILDTATPDSYSAAPDNDHDSILVSTISADLEQLEEEVRRKIELEEEEKKLEETLELQRRIENEAKLKHLAEQQKKSSVTYLEKSADKFLDCQLRAVADGPEVHEHMRPPMLEQLPNINGYPSNSDGVHIATSNGSAVPDISLLDSVNQTIHHKHPTNIKQDLSCKIAPENDFQLAEQRTGKKGKRHKNSSRLVVGKFEAVSLDKENTDAYTDNQSREQVKFHNNQDANNG 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci396g0008 1221 Pfam Protein of unknown function (DUF627) 74 184 IPR006866 -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 955 984 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 1195 1221 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 37 56 - -
Prci396g0008 1221 Coils Coil 202 222 - -
Prci396g0008 1221 Coils Coil 1014 1054 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 953 984 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 291 333 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 1203 1221 - -
Prci396g0008 1221 MobiDBLite consensus disorder prediction 12 29 - -
Prci396g0008 1221 Pfam Protein of unknown function (DUF629) 344 868 IPR006865 -
Prci396g0008 1221 ProSitePatterns Zinc finger C2H2 type domain signature. 401 422 IPR013087 -
Prci396g0008 1221 Coils Coil 723 743 - -
Prci396g0008 1221 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1136 - -
Prci396g0008 1221 Gene3D Tetratricopeptide repeat domain 37 297 IPR011990 GO:0005515
Prci396g0008 1221 MobiDBLite consensus disorder prediction 1 62 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci396g0008 60 1141 C2H2 Transcription Factor Family AT3G47890 55.696 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci396g0008 - - pcin:129296941 2359.72