Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci395g0010 ATGCAATCTCACCTCTCCTCTAAGCCTTCCTTCCTCCTCCCCGTCGACGTCCAAGAGAGAGCCACCGTGTTCCGCCCACTTTCGCTCGCCCCACCTCACATGCGCGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTTCCCGTTATCCTCCACGACCTCCACCTCACCCCCACTGACATTGGCAACGCCGGCGTCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCATCTGCGACCTCGTCGGCCCCCGCATAGCCTCCGGCACTCTCTCCCTCCTAACAGCACCTGTCATCCTCGTAACCGCTTTCGTGTGCACACCCCAATCCTTCATCATCATTCGCTTCCTCGTCGGCTTCTCTCTGGCCAACTTCGTGTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCCCCTCCATAGTAGGCCTGGCTAATGGTGTTGCAGCCGGGTGGGCCAACGTGGGCTCGGGTGTGACCCAACTTGTTATGCCTCTGATCTACTCTCTCATCATGCACTTCAACGTCCCGTCTTCCATTGCTTGGAGGCTTGCGTTTGTTGTTCCTGCAATTTTCCAAGCAACCACAGGGATACTGGTCCTGGCTTTCGGGCAAGACCTGCCTTCGGGGAAATACGTGCGTACTAGCCAGACCCAGAAGGGTGAAAGAGAGAACGCATTGAAGATTGTATTGGAGGGCTTGACCAATTACAGAGGGTGGATTTTGGGCCTGCTTTATGGGTTCTCTTTCGGGGTGGAACTAACTACAGACAACATAATAGCACAGTACTTTTATGACAGGTTTGACGTGGATATTGAAGTTGCGGGGAGTATAGCGGCAAGTTTTGGGATGGCGAATTTGTTCTCGCGGCCTCTGGGAGGAGTGATTTCTGATGGGATGGGAAGGAGGTTTGGCATGAGAGGGAGATTGTGGGCTTTGTGGGTGGTCCAAACAGTGGCTGGACTTCTCTGTGTGTTACTTGGACGCCTCAACTCTCTCTGCAGCTCTATCCTCGTCATGTGTGCTTTCTCCGTGTTTGTCCAAGCAGCTTCTGGCCTCATATTCGGTGTCGTCCCCTTCGTTTCCAAGAGGTTAGCTCACTATCTCATTATTCCATTGAGCTTCGAGACAAACCCACGTCAGAGCAAGAAGGAAAGTAAAACACGGCTCGTATTTGTTGATCGCTTGGAGTAA 1236 0.538 MQSHLSSKPSFLLPVDVQERATVFRPLSLAPPHMRAFHLAWLNLFSCFFSTFSIPPLLPVILHDLHLTPTDIGNAGVASFVGSIFSRLLMGPICDLVGPRIASGTLSLLTAPVILVTAFVCTPQSFIIIRFLVGFSLANFVSSQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLIYSLIMHFNVPSSIAWRLAFVVPAIFQATTGILVLAFGQDLPSGKYVRTSQTQKGERENALKIVLEGLTNYRGWILGLLYGFSFGVELTTDNIIAQYFYDRFDVDIEVAGSIAASFGMANLFSRPLGGVISDGMGRRFGMRGRLWALWVVQTVAGLLCVLLGRLNSLCSSILVMCAFSVFVQAASGLIFGVVPFVSKRLAHYLIIPLSFETNPRQSKKESKTRLVFVDRLE 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci395g0010 411 CDD MFS_NRT2_like 37 378 IPR044772 GO:0015112
Prci395g0010 411 ProSitePatterns Sugar transport proteins signature 1. 307 322 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci395g0010 411 FunFam Probable high-affinity nitrate transporter 2.4 29 224 - -
Prci395g0010 411 SUPERFAMILY MFS general substrate transporter 26 375 IPR036259 -
Prci395g0010 411 FunFam Nitrate transporter 2.1 237 384 - -
Prci395g0010 411 Pfam Major Facilitator Superfamily 41 370 IPR011701 GO:0022857|GO:0055085
Prci395g0010 411 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 411 IPR020846 GO:0022857
Prci395g0010 411 Gene3D MFS general substrate transporter like domains 32 229 IPR036259 -
Prci395g0010 411 Gene3D MFS general substrate transporter like domains 238 404 IPR036259 -
Prci395g0010 411 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 6 379 IPR044772 GO:0015112
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci395g0010 6 378 Inorganic Solute Cotransporters AT5G14570 64.010 4.76e-178 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci395g0010 K02575 - qsa:O6P43_008930 588.571