Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci395g0009 ATGCAATCTCACCTCTCCTCTAAGCCTTCCTTCCTCCTCCCCGTCGACGTCCAAGAGAGAGCCACCGTGTTCCGCCCACTTTCGCTCGCCCCACCTCACATGCGCGCCTTCCATCTTGCATGGCTCAACCTCTTCTCTTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTTCCCGTTATCCTCCACGACCTCCACCTCACCCCCACTGACATTGGCAACGCCGGCGTCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGCCCCATCTGCGACCTCGTCGGCCCCCGCATAGCCTCCGGCACTCTCTCCCTCCTAACAGCACCTGTCATCCTCGTAACCGCTTTCGTGTGCACACCCCAATCCTTCATCATCATTCGCTTCCTCGTCGGCTTCTCTCTGGCCAACTTCGTGTCCAGCCAGTTCTGGATGAGCTCCATGTTCTCCCCCTCCATAGTAGGCCTGGCTAATGGTGTTGCAGCCGGGTGGGCCAACGTGGGCTCGGGTGTGACCCAACTTGTTATGCCTCTGATCTACTCTCTCATCATGCACTTCAACGTCCCGTCTTCCATTGCTTGGAGGCTTGCGTTTGTTGTTCCTGCAATTTTCCAAGCAACCACAGGGATACTGGTCCTGGCTTTCGGGCAAGACCTGCCTTCGGGGAAATACGTGCGTACTAGCCAGACCCAGAAGGGTGAAAGAGAGAACGCATTGAAGATTGTATTGGAGGGCTTGACCAATTACAGAGGGTGGATTTTGGGCCTGCTTTATGGGTTCTCTTTCGGGGTGGAACTAACTACAGACAACATAATAGCACAGTACTTTTATGACAGGTTTGACGTGGATATTGAAGTTGCGGGGAGTATAGCGGCAAGTTTTGGGATGGCGAATTTGTTCTCGCGGCCTCTGGGAGGAGTGATTTCTGATGGGATGGGAAGGAGGTTTGGCATGAGAGGGAGATTGTGGGCTTTGTGGGTGGTCCAAACAGTGGCTGGACTTCTCTGTGTGTTACTTGGACGCCTCAACTCTCTCTGCAGCTCTATCCTCGTCATGTGTGCTTTCTCCGTGTTTGTCCAAGCAGCTTCTGGCCTCATATTCGGTGTCGTCCCCTTCGTTTCCAAGAGATCGCTTGGAGTAATTTCAGGGATGACGGGGAGCGGAGGAACTGTTGGGGCCGTGGTGACTCAAACGCTGTTGTTTTCAGGGGCCCAATTCTCAAGGCAAACAAGCATATCTCTGATGGGCATTATGATGGTACTGTGCACTCTTCCAGTGACCTTGCTGTATTTCCCTCAATGGGGAGGCATGTTCTGTGGCCCTTCATCAGATGCCGATTCCCCTGAAGAAAATGATCGCCTGCTACATTAG 1377 0.5403 MQSHLSSKPSFLLPVDVQERATVFRPLSLAPPHMRAFHLAWLNLFSCFFSTFSIPPLLPVILHDLHLTPTDIGNAGVASFVGSIFSRLLMGPICDLVGPRIASGTLSLLTAPVILVTAFVCTPQSFIIIRFLVGFSLANFVSSQFWMSSMFSPSIVGLANGVAAGWANVGSGVTQLVMPLIYSLIMHFNVPSSIAWRLAFVVPAIFQATTGILVLAFGQDLPSGKYVRTSQTQKGERENALKIVLEGLTNYRGWILGLLYGFSFGVELTTDNIIAQYFYDRFDVDIEVAGSIAASFGMANLFSRPLGGVISDGMGRRFGMRGRLWALWVVQTVAGLLCVLLGRLNSLCSSILVMCAFSVFVQAASGLIFGVVPFVSKRSLGVISGMTGSGGTVGAVVTQTLLFSGAQFSRQTSISLMGIMMVLCTLPVTLLYFPQWGGMFCGPSSDADSPEENDRLLH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci395g0009 458 ProSitePatterns Sugar transport proteins signature 1. 307 322 IPR005829 GO:0016020|GO:0022857|GO:0055085
Prci395g0009 458 Gene3D MFS general substrate transporter like domains 32 229 IPR036259 -
Prci395g0009 458 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 6 449 IPR044772 GO:0015112
Prci395g0009 458 ProSiteProfiles Major facilitator superfamily (MFS) profile. 36 430 IPR020846 GO:0022857
Prci395g0009 458 FunFam Nitrate transporter 2.1 237 438 - -
Prci395g0009 458 CDD MFS_NRT2_like 37 430 IPR044772 GO:0015112
Prci395g0009 458 Gene3D MFS general substrate transporter like domains 238 437 IPR036259 -
Prci395g0009 458 SUPERFAMILY MFS general substrate transporter 26 432 IPR036259 -
Prci395g0009 458 FunFam Probable high-affinity nitrate transporter 2.4 29 224 - -
Prci395g0009 458 Pfam Major Facilitator Superfamily 41 396 IPR011701 GO:0022857|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci395g0009 6 443 Inorganic Solute Cotransporters AT5G14570 64.758 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci395g0009 K02575 - qsa:O6P43_008930 691.034