Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci390g0005 ATGTTAATGGAAGTGCCGGAGTACTTTGTCGGTGGCTATTTCTCTGCCGGAGGAGATCAATTCTCGCCGGAGAAGCGCCATGGTGCTGACCAGAAGCCTGGTGAGCCCTTCGCCATTGACGACCTCCTTGACTTCTCCAACGCCGACGCTATGATCATGTCCGACGGTTTCTTCGACAATGCCGCCGGCAACTCCACTGTCACCGCCGTTGACAGCTGTAATTCGTCCGTTTCGGGCGGTGACAATCATTTCTCCTCTGGCAACGCTGGCTCCCGCGGCTCTGGCGATCCTCAATTATCCGGAGAACTCTGCGTTCCGTACGACGACTTGGCTGAACTGGAATGGCTATCGAACTTCGTGGAAGACTCATTCTCGGTCGAAGATGAGCTACAAACACTCCACCTCATCTCCGGCACCACTTCTTCCGCCATCGGCACGAAGCCTCAGACACCAGAGTCCTCCTCTTCCTCCGAAACACTTCAACACTTCGCCGCTGACACCGCTCGAAACGCACCGCTTTTCCATCCAGAAACTCCGCTTCCGGGTAAAGCTCGCAGCAAGCGTACAAGAGCTGCCCCCGGGGATTGGTCTACTCGCTTCCTCCACCTGATCACCCCAACGGTCGTGCCGGAACCGGCTCAAGCGAAGGCGGCGGCAAAGAAAAGAGAGAGTTCGAATTCGGAGTACTCTTCGGGTAGGAAATGCCTGCATTGCGCCGCCGACAAGACTCCACAATGGCGGACGGGACCAATGGGCCCGAAGACGCTGTGTAATGCTTGCGGAGTGCGTTACAAGTCCGGAAGGCTGGTGCCGGAGTACCGACCGGCTGCGAGCCCGACTTTTGTGTTGTCAAAGCACTCTAATTCGCACAGGAAGGTGATGGAGCTGAGGAGGCAGAAGGAAATGCAGAGGCAGCAACATCAACAATTGGTTAGCCACAATTCAATTTTCGGCGTTTCTCACGGGGAGATGAGTTCCTGA 981 0.5596 MLMEVPEYFVGGYFSAGGDQFSPEKRHGADQKPGEPFAIDDLLDFSNADAMIMSDGFFDNAAGNSTVTAVDSCNSSVSGGDNHFSSGNAGSRGSGDPQLSGELCVPYDDLAELEWLSNFVEDSFSVEDELQTLHLISGTTSSAIGTKPQTPESSSSSETLQHFAADTARNAPLFHPETPLPGKARSKRTRAAPGDWSTRFLHLITPTVVPEPAQAKAAAKKRESSNSEYSSGRKCLHCAADKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLSKHSNSHRKVMELRRQKEMQRQQHQQLVSHNSIFGVSHGEMSS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci390g0005 326 MobiDBLite consensus disorder prediction 168 193 - -
Prci390g0005 326 PIRSF Txn_fac_GATA_plant 23 321 IPR016679 GO:0003677|GO:0005634|GO:0045893
Prci390g0005 326 ProSiteProfiles GATA-type zinc finger domain profile. 229 265 IPR000679 GO:0006355|GO:0043565
Prci390g0005 326 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 231 293 - -
Prci390g0005 326 ProSitePatterns GATA-type zinc finger domain. 235 260 IPR000679 GO:0006355|GO:0043565
Prci390g0005 326 SMART GATA_3 229 279 IPR000679 GO:0006355|GO:0043565
Prci390g0005 326 Pfam GATA zinc finger 235 268 IPR000679 GO:0006355|GO:0043565
Prci390g0005 326 Gene3D - 230 313 IPR013088 GO:0006355|GO:0008270
Prci390g0005 326 PANTHER GATA TRANSCRIPTION FACTOR 31 308 - -
Prci390g0005 326 MobiDBLite consensus disorder prediction 141 160 - -
Prci390g0005 326 FunFam GATA transcription factor 224 310 - -
Prci390g0005 326 CDD ZnF_GATA 234 281 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci390g0005 35 323 C2C2-Gata Transcription Factor Family AT4G32890 47.195 8.38e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci390g0005 GATA 7.8e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci390g0005 - - gmx:100776605 444.506