Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci38g0007 ATGACGCCATTACAGCCTCTATTTGATTACCCAAAGCAAAACACTGAAAGAATCAGCAGAATGATCTTTTCAGCGTCAAAGAAAATATCTAAAGGTGAAGATACTTTAGACGACAGGTACAAGTGGAGGGAATATGGCCAGAAAACAGAGGACAGACTAAATCCAAGGAGCTATTTCAAATGTGTTGAAGGAGGTTGCTTTGCTAAAAAGCGAGTGCAGAGATCTGAAGAAGACCCAACCATTGTCGAAATCACATACAAGGGATGTCACACTTGCACAGAGGCCTCCAGTGTAACAGATTCATCCATGAATAATCAGGTTTACTTAACCACTCAATGTGGGGTAGATGATGATGATATTGACAATGATCTAGTATTTGGTCGTGTTTAG 390 0.4026 MTPLQPLFDYPKQNTERISRMIFSASKKISKGEDTLDDRYKWREYGQKTEDRLNPRSYFKCVEGGCFAKKRVQRSEEDPTIVEITYKGCHTCTEASSVTDSSMNNQVYLTTQCGVDDDDIDNDLVFGRV 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci38g0007 129 Gene3D WRKY domain 22 95 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci38g0007 129 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 93 IPR044810 GO:0003700
Prci38g0007 129 SUPERFAMILY WRKY DNA-binding domain 33 93 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci38g0007 129 Pfam WRKY DNA -binding domain 37 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci38g0007 129 ProSiteProfiles WRKY domain profile. 31 90 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci38g0007 129 SMART WRKY_cls 36 94 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci38g0007 17 91 WRKY Transcription Factor Family AT5G49520 48.684 3.78e-17 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci38g0007 WRKY 2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci38g0007 - - pcin:129295049 257.684