Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci38g0007 | ATGACGCCATTACAGCCTCTATTTGATTACCCAAAGCAAAACACTGAAAGAATCAGCAGAATGATCTTTTCAGCGTCAAAGAAAATATCTAAAGGTGAAGATACTTTAGACGACAGGTACAAGTGGAGGGAATATGGCCAGAAAACAGAGGACAGACTAAATCCAAGGAGCTATTTCAAATGTGTTGAAGGAGGTTGCTTTGCTAAAAAGCGAGTGCAGAGATCTGAAGAAGACCCAACCATTGTCGAAATCACATACAAGGGATGTCACACTTGCACAGAGGCCTCCAGTGTAACAGATTCATCCATGAATAATCAGGTTTACTTAACCACTCAATGTGGGGTAGATGATGATGATATTGACAATGATCTAGTATTTGGTCGTGTTTAG | 390 | 0.4026 | MTPLQPLFDYPKQNTERISRMIFSASKKISKGEDTLDDRYKWREYGQKTEDRLNPRSYFKCVEGGCFAKKRVQRSEEDPTIVEITYKGCHTCTEASSVTDSSMNNQVYLTTQCGVDDDDIDNDLVFGRV | 129 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci38g0007 | 129 | Gene3D | WRKY domain | 22 | 95 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci38g0007 | 129 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 16 | 93 | IPR044810 | GO:0003700 | |
Prci38g0007 | 129 | SUPERFAMILY | WRKY DNA-binding domain | 33 | 93 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci38g0007 | 129 | Pfam | WRKY DNA -binding domain | 37 | 92 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci38g0007 | 129 | ProSiteProfiles | WRKY domain profile. | 31 | 90 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci38g0007 | 129 | SMART | WRKY_cls | 36 | 94 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci38g0007 | 17 | 91 | WRKY Transcription Factor Family | AT5G49520 | 48.684 | 3.78e-17 | 74.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Prci38g0007 | WRKY | 2e-19 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci38g0007 | - | - | pcin:129295049 | 257.684 |