Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci389g0002 ATGATGAACGGCGGAAAGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTCGAACATCAAGCCCTTATTTTCAAGTACATGGCTTCAGGCATTCCCATTCCTCCTGATCTTGTCTTCTCCATCAAAAGGGCCTCTCTTAACTCTCCTCTTTCTTCAAGGCTCTTGTCCCTCCCACCTCAACACTTTGGGTGGAACTATTTGGAGATGGGTTTGGGAAGAAAGATAGACACGGAACCAGGAAGGTGCAGGAGAACAGATGGGAAGAAATGGAGATGTTCCAAAGAAGCTTACCCAAATTCCAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTGCAGCAACAGCAACAAGGCTTTAGAACAACGTTAACCTCACCAACGAACCATACAAATTCGTCAACAGTCACGAAAAGCAACAACATTCCTCCTCCTTCACTCTCCCTCACCACTCATTCCTCATCTCTCACACCTCTCTCTGATGCCACCCACAATCATTCCTTCCTCTATAATCATCAGCATCCTTCAAGGTCGTCTTCATCATCGGCTTTTGGCTTCTCTTTACAAGATGATTGTGCCTCTCACTTGAATAGTGGTTATGTTTATGATGGACTGAAAGAAGAGGTAGACGAGCATGCTTTCTTCAAAGAGCCTTCTGGGACCATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCATGGCATCTCGCGCCACTCTCAATGAGCTCATCGTCTTCTTCCTCGAAGCAGAGGAGCTACTCTGGTTTGTCCACCGAGTACTCTTCTTACTTGCAGCTTCAGAATCAGAACCTTGGTGAATGTACGAACCAGCAAGATCAAGATTACTACATGCTGGGACTGGGGAAATCAGAAGAGCCTCAGAATCAGAAGACCGTTCATCGCTTCTTCGACGAATCGCCCAACAAAAGCAAAAACTCGTGGCTTGATTGTGACGATAAATCGTCCACAACCCAGCTTTCAATATCCATTCCCACCTCCTCTGATGATCACGACCATTTTCCAAGCTTCAATTTCAGAACCCACCAAGATGTTTGA 1080 0.4565 MMNGGKNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLNSPLSSRLLSLPPQHFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQQQGFRTTLTSPTNHTNSSTVTKSNNIPPPSLSLTTHSSSLTPLSDATHNHSFLYNHQHPSRSSSSSAFGFSLQDDCASHLNSGYVYDGLKEEVDEHAFFKEPSGTMRSFSASSMEDSSWHLAPLSMSSSSSSSKQRSYSGLSTEYSSYLQLQNQNLGECTNQQDQDYYMLGLGKSEEPQNQKTVHRFFDESPNKSKNSWLDCDDKSSTTQLSISIPTSSDDHDHFPSFNFRTHQDV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci389g0002 359 PANTHER GROWTH-REGULATING FACTOR 5 9 344 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci389g0002 359 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci389g0002 359 Pfam WRC 80 119 IPR014977 -
Prci389g0002 359 MobiDBLite consensus disorder prediction 333 359 - -
Prci389g0002 359 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci389g0002 359 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Prci389g0002 359 MobiDBLite consensus disorder prediction 119 165 - -
Prci389g0002 359 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci389g0002 10 173 GRF Transcription Factor Family AT4G37740 42.105 2.76e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci389g0002 WRC 5.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci389g0002 - - gmx:100781613 369.007