Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci389g0001 ATGATGAACGGCGGAAAGAACAGGTTCCCTTTTACTCCATCACAGTGGCAAGAGCTCGAACATCAAGCCCTTATTTTCAAGTACATGGCTTCAGGCATTCCCATTCCTCCTGATCTTGTCTTCTCCATCAAAAGGGCCTCTCTTAACTCTCCTCTTTCTTCAAGGCTCTTGTCCCTCCCACCTCAACACTTTGGGTGGAACTATTTGGAGATGGGTTTGGGAAGAAAGATAGACACGGAACCAGGAAGGTGCAGGAGAACAGATGGGAAGAAATGGAGATGTTCCAAAGAAGCTTACCCAAATTCCAAGTACTGTGAGAGACACATGCACAGAGGAAATAACCGTTTGAGAAAACCTCTGCAGCAACAGCAACAAGGCTTTAGAACAACGTTAACCTCACCAACGAACCATACAAATTCGTCAACAGTCACGAAAAGCAACAACATTCCTCCTCCTTCACTCTCCCTCACCACTCATTCCTCATCTCTCACACCTCTCTCTGATGCCACCCACAATCATTCCTTCCTCTATAATCATCAGCATCCTTCAAGGTCGTCTTCATCATCGGCTTTTGGCTTCTCTTTACAAGATGATTGTGCCTCTCACTTTAGGAATAGTGGTTATGTTTATGATGGACTGAAAGAAGAGGTAGACGAGCATGCTTTCTTCAAAGAGCCTTCTGGGACCATGAGAAGCTTCTCTGCTTCATCAATGGAAGATTCTTCATGGCATCTCGCGCCACTCTCAATGAGCTCATCGTCTTCTTCCTCGAAGCAGAGGAGCTACTCTGGTTTGTCCACCGAGTACTCTTCTTACTTGCAGCTTCAGAATCAGAACCTTGGTGAATGTACGAACCAGCAAGATCAAGATTACTACATGCTGGGACTGGGGAAATCAGAAGAGCCTCAGAATCAGAAGACCGTTCATCGCTTCTTCGACGAATCGCCCAACAAAAGCAAAAACTCGTGGCTTGATTGTGACGATAAATCGTCCACAACCCAGCTTTCAATATCCATTCCCACCTCCTCTGATGATCACGACCATTTTCCAAGCTTCAATTTCAGAACCCACCAAGATGTTTGA 1083 0.4561 MMNGGKNRFPFTPSQWQELEHQALIFKYMASGIPIPPDLVFSIKRASLNSPLSSRLLSLPPQHFGWNYLEMGLGRKIDTEPGRCRRTDGKKWRCSKEAYPNSKYCERHMHRGNNRLRKPLQQQQQGFRTTLTSPTNHTNSSTVTKSNNIPPPSLSLTTHSSSLTPLSDATHNHSFLYNHQHPSRSSSSSAFGFSLQDDCASHFRNSGYVYDGLKEEVDEHAFFKEPSGTMRSFSASSMEDSSWHLAPLSMSSSSSSSKQRSYSGLSTEYSSYLQLQNQNLGECTNQQDQDYYMLGLGKSEEPQNQKTVHRFFDESPNKSKNSWLDCDDKSSTTQLSISIPTSSDDHDHFPSFNFRTHQDV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci389g0001 360 ProSiteProfiles QLQ domain profile. 10 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci389g0001 360 Pfam QLQ 10 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Prci389g0001 360 ProSiteProfiles WRC domain profile. 78 122 IPR014977 -
Prci389g0001 360 MobiDBLite consensus disorder prediction 119 165 - -
Prci389g0001 360 PANTHER GROWTH-REGULATING FACTOR 5 9 345 IPR031137 GO:0005634|GO:0006351|GO:0032502
Prci389g0001 360 MobiDBLite consensus disorder prediction 334 360 - -
Prci389g0001 360 Pfam WRC 80 119 IPR014977 -
Prci389g0001 360 SMART QLQ_2 9 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci389g0001 8 124 GRF Transcription Factor Family AT3G13960 70.085 3.63e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Prci389g0001 WRC 5.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci389g0001 - - gmx:100781613 372.089