Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci388g0006 ATGGAGGGCCATGATGCTGAGAAACTCTATGGAGTGCCTAATTCCAGCTCAACCCAGCATCCCCAATTTCCATCTGCAACTGAGAAACCTGTTCTCAACATGGAAACAGTGGAAGAGTACCATGTCTTTGCTCATTTGGATCCATTTCAAAGCTCACATTGCATTCCACTTTATTACTCACAAGTTCACCTTCCCAATAGTCTGACTCAAATCCCGCGCCATAAATCCTCTCCAAATGCATCCCTTCACAGCAGCAACAATGAAGCAAAAGCTATCGTTGATGACCAGAAGAGAAGAAGAATGCTTTCTAACAGAGAATCTGCACGCAAATCTCGAATGCGGAAGAAGCAACAAATAGAAGCCCTTCAGTGTCGCGTAAATGATTTGCAAGCAATGAATGATCAACTATCTCGAAAAATCATCAGTTTGCTGGAATGTAATCAGGAAATGCTTCAACAGAATGTTCAGCTTAAAGAGAAGGTTTCCTCTCTCCAAGAAGCTCTCTCAGACTTGTTAATCCCCAATGGCCCCACAGCAGAGCCTTCACAAGCATAA 555 0.4324 MEGHDAEKLYGVPNSSSTQHPQFPSATEKPVLNMETVEEYHVFAHLDPFQSSHCIPLYYSQVHLPNSLTQIPRHKSSPNASLHSSNNEAKAIVDDQKRRRMLSNRESARKSRMRKKQQIEALQCRVNDLQAMNDQLSRKIISLLECNQEMLQQNVQLKEKVSSLQEALSDLLIPNGPTAEPSQA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci388g0006 184 CDD bZIP_plant_GBF1 97 145 IPR045314 GO:0003700|GO:0006355
Prci388g0006 184 FunFam BZIP transcription factor 94 145 - -
Prci388g0006 184 Pfam bZIP transcription factor 96 154 IPR004827 GO:0003700|GO:0006355
Prci388g0006 184 Gene3D - 95 149 - -
Prci388g0006 184 SMART brlzneu 92 156 IPR004827 GO:0003700|GO:0006355
Prci388g0006 184 MobiDBLite consensus disorder prediction 71 115 - -
Prci388g0006 184 SUPERFAMILY Leucine zipper domain 96 152 IPR046347 GO:0003700|GO:0006355
Prci388g0006 184 MobiDBLite consensus disorder prediction 11 25 - -
Prci388g0006 184 Coils Coil 147 167 - -
Prci388g0006 184 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 30 179 IPR044521 -
Prci388g0006 184 Coils Coil 105 139 - -
Prci388g0006 184 MobiDBLite consensus disorder prediction 71 89 - -
Prci388g0006 184 MobiDBLite consensus disorder prediction 1 25 - -
Prci388g0006 184 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 94 143 IPR004827 GO:0003700|GO:0006355
Prci388g0006 184 MobiDBLite consensus disorder prediction 90 115 - -
Prci388g0006 184 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci388g0006 36 174 bZIP Transcription Factor Family AT5G60830 43.537 1.62e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Prci388g0006 bZIP_1 6.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci388g0006 - - pcin:129319721 292.737