Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci37g0003 ATGACGAAGTTGTACTGCAAGAAATACAATGACTACATGCAAAGCCAGCAGGAGAAGAAGCTTCCTGAAGTTGATATCAATAAGCTCAAGACTATCTTGAAAACATGTCGCAGAGATTGTCCTTGCCGGAAAGGCATCACCGGAGGAGGAGGAGGAGAAGAAGAAGAAGCCCTTGCAGTCCCAAAGTGCACCGATCGTTGCCCAGTGTGTGATGGAAGCTCCTTCTTTCCTTCTCTTCTCAATGGGATGAGTGAAGTAGTGGCTTACTTTAACGATCGAGCCCGGAAATTGATTGAGCTTCATCGTGCTTCTAGCTTCAAGAAGTACTTTCTATCCTTCAAAACCAAATTATGTGGACAACAACATATTGACCACATTCAAGAAGGCAAAGATCTTGTTACTTACGCCCTAATCACTTCCACTGTAATTCACAAGATACTCGAAAAATACGATAAGATTCATTATTCGAAGCAAGGGCAATTATTCAAGTCAAGAGCCCAGAGTATGCACGTGGAAATTCTTCGGAGTCCCTGGCTTTTAGAACTCATGGCCTTCCACATCAATTTAAGGGAAGCCAAGAGCGAATCAATGAACAAGGAATCTAATAATTCCTTTGATGGATACTACCTTACATTTAAGGATAATAAACCATCGCTTACTTTTGAGCACTTTGATTCCACCAAACTTGATATTGAATTGACTTGTTCTATATGCTTGGACACTGTTTTTGATCCGGTTTGTCTAACTTGTGGCCATATCTTCTGCTACACGTGCGCTTGTTCATCTGCATCAGTAGCTATTGTTGATGGGCTCAAGGCATCGAACTCTGCAGCAAAGTGTCCCCTATGCCGGGTGGGAGGAGTTTATCAAGGTGCTATACGCTTGGAAGAACTGAATATCTTGTTAGGCAGAAGTTGTCAGGAATATTGGGAACAAAGGCTTCAAACAGAGAGGATAGAAAGAGTTAAGCAAATAAAAGAGTACTGGGAATCGCAATGCAGAGCATTCATAGGTGTCTAA 1020 0.4206 MTKLYCKKYNDYMQSQQEKKLPEVDINKLKTILKTCRRDCPCRKGITGGGGGEEEEALAVPKCTDRCPVCDGSSFFPSLLNGMSEVVAYFNDRARKLIELHRASSFKKYFLSFKTKLCGQQHIDHIQEGKDLVTYALITSTVIHKILEKYDKIHYSKQGQLFKSRAQSMHVEILRSPWLLELMAFHINLREAKSESMNKESNNSFDGYYLTFKDNKPSLTFEHFDSTKLDIELTCSICLDTVFDPVCLTCGHIFCYTCACSSASVAIVDGLKASNSAAKCPLCRVGGVYQGAIRLEELNILLGRSCQEYWEQRLQTERIERVKQIKEYWESQCRAFIGV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci37g0003 339 ProSitePatterns Zinc finger RING-type signature. 250 259 IPR017907 -
Prci37g0003 339 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 6 338 IPR033326 -
Prci37g0003 339 SMART ring_2 235 283 IPR001841 -
Prci37g0003 339 SUPERFAMILY RING/U-box 228 285 - -
Prci37g0003 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 210 336 IPR013083 -
Prci37g0003 339 Pfam Zinc finger, C3HC4 type (RING finger) 233 284 - -
Prci37g0003 339 ProSiteProfiles Zinc finger RING-type profile. 235 284 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci37g0003 225 284 C3H Transcription Factor Family AT4G28270 38.806 1.41e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci37g0003 K16275 - gmx:100797432 438.728