Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci37g0002 ATGACGAAGTTGTACTGCAAGAAATACAATGACTACATGCAAAGCCAGCAGGAGAAGAAGCTTCCTGAAGTTGATATCAATAAGCTCAAGACTATCTTGAAAACATGTCGCAGAGATTGTCCTTGCCGGAAAGGCATCACCGGAGGAGGAGGAGGAGAAGAAGAAGAAGCCCTTGCAGTCCCAAAGTGCACCGATCGTTGCCCAGTGTGTGATGGAAGCTCCTTCTTTCCTTCTCTTCTCAATGGGATGAGTGAAGTAGTGGCTTACTTTAACGATCGAGCCCGGAAATTGATTGAGCTTCATCGTGCTTCTAGCTTCAAGAAGTACTTTCTATCCTTCAAAACCAAATTATGTGGACAACAACATATTGACCACATTCAAGAAGGCAAAGATCTTGTTACTTACGCCCTAATCACTTCCACTGTAATTCACAAGATACTCGAAAAATACGATAAGATTCATTATTCGAAGCAAGGGCAATTATTCAAGTCAAGAGCCCAGAGTATGCACGTGGAAATTCTTCGGAGTCCCTGGCTTTTAGAACTCATGGCCTTCCACATCAATTTAAGGGAAGCCAAGAGCGAATCAATGAACAAGGAATCTAATAATTCCTTTGATGGATACTACCTTACATTTAAGGATAATAAACCATCGCTTACTTTTGAGCACTTTGATTCCACCAAACTTGATATTGAATTGACTTGTTCTATATGCTTGGACACTGTTTTTGATCCGGTTTGTCTAACTTGTGGCCATATCTTCTGCTACACGTGCGCTTGTTCATCTGCATCAGTAGCTATTGTTGATGGGCTCAAGGCATCGAACTCTGCAGCAAAGTGTCCCCTATGCCGGGTGGGAGGAGTTTATCAAGGTGCTATACGCTTGGAAGAACTGAATATCTTGTTAGGCAGAAGGCCCAACTGA 924 0.4264 MTKLYCKKYNDYMQSQQEKKLPEVDINKLKTILKTCRRDCPCRKGITGGGGGEEEEALAVPKCTDRCPVCDGSSFFPSLLNGMSEVVAYFNDRARKLIELHRASSFKKYFLSFKTKLCGQQHIDHIQEGKDLVTYALITSTVIHKILEKYDKIHYSKQGQLFKSRAQSMHVEILRSPWLLELMAFHINLREAKSESMNKESNNSFDGYYLTFKDNKPSLTFEHFDSTKLDIELTCSICLDTVFDPVCLTCGHIFCYTCACSSASVAIVDGLKASNSAAKCPLCRVGGVYQGAIRLEELNILLGRRPN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci37g0002 307 ProSitePatterns Zinc finger RING-type signature. 250 259 IPR017907 -
Prci37g0002 307 SMART ring_2 235 283 IPR001841 -
Prci37g0002 307 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 6 305 IPR033326 -
Prci37g0002 307 SUPERFAMILY RING/U-box 228 285 - -
Prci37g0002 307 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 184 297 IPR013083 -
Prci37g0002 307 ProSiteProfiles Zinc finger RING-type profile. 235 284 IPR001841 -
Prci37g0002 307 Pfam Zinc finger, C3HC4 type (RING finger) 233 284 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci37g0002 225 284 C3H Transcription Factor Family AT4G28270 38.806 1.20e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci37g0002 K16275 - qsa:O6P43_010771 369.777