Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci371g0002 ATGACGCAGTTCACACCAACGCTACCACCTTTGCACCATGTCACGCCCCTTTCGAACTCAATCAGCAATAACAACAACATTCAAGTTCCTAGGACGACGAATTCATGGCCGAAATTCCAACAATCCAAGGCACTAGTTGGCTTTGGCGATGCTAATTGCATGGAACAGTTGCTTATTCACTGCGCCGACGCCATGGAAGCCAATGACGTCACTCTCGCCCAGCAAATCCTCTGGGTTCTGAACAACATCGCACCTCCCGACGGCGACTCAAATCAGCGTCTCGCGGCCACCTTCTTGAGCGCCCTCACCTCACGCGCCGCCAAATCTGGGAGCTCCAAAATGTTAGCCGCCGTCACAAGCGCCCGCAACACCGGTCTCGCCATTCAAACGCACCGCTTCTCCATCATCGAGCTTGCCAACTTCGTTGATGTCACCCCCTGGCATCGTTTCGGCTTCACAGCAGCTAATTTGGCTATTCTAGAAGCCACGGAAGGTTTCTCCACCATTCACATCGTTGACCTCAGCTCAACACACTGCATGCAGATTCCCACCCTAATTGACGCCATCGCTTCTCGCCACGACGTCCCTCCTCTGATCAAGCTGACGGTAGTGGGTGCTTCTAGAAACATCCCACCTATAATCGACCTTTCCTATGACGAACTGGGTTCAAAGCTGGTCAATTTCGCAAAGTCCAAAAACGTCGTGATGGATTTTAGAGTGATTTCTTCTACTCACGCAGATGGATTCGCTGCTTTGATCCAATATCTTGGTGTGCACCGTCTCGTGACGGAAGCTCTGGTGATAAACTGTCACATGATGCTTCATTGTATTCCTGACGAAACCCTATCCGCCACTTCCACTTCATCCCTGAGATCACTGTTCCTGAAGGCTTTGCGGAGTTTGAACCCAACGCTTGTCGTTTTGGTGGAGGAGGACGCGGATTTGACACCGATGGATTTGGTGTGCAGGCTGAGGGCTGCGTTTAATTATATGTGGATACCGTACGACACGATGGACACGTTTCTTCAACGAGGAAGCGAGCAAAGGCAATGGTACGAAGCGGATATGTGTTGGAAGATTGAGAACGTGATGGCGCATGAAGGGGTTGAGAGAGTTGAGAGGCTGGAGAGTAAGAGCAGGTGGGAGCAGCGAATGAGAGATGCGGAGTTCCAGGGTATTAGCTTCAGCGACGACGCCGTTTCGGAGGTGAAGGCCATGCTGGACGAGCATGCAGCTGCGTGGGGATTGAAGAAGGAAGAGCAGCATCTTTTGCTAACGTGGAAAGGACATAATGTCGTCTTTGCCTCTGCTTGGTTTCTTGCTTGA 1326 0.5143 MTQFTPTLPPLHHVTPLSNSISNNNNIQVPRTTNSWPKFQQSKALVGFGDANCMEQLLIHCADAMEANDVTLAQQILWVLNNIAPPDGDSNQRLAATFLSALTSRAAKSGSSKMLAAVTSARNTGLAIQTHRFSIIELANFVDVTPWHRFGFTAANLAILEATEGFSTIHIVDLSSTHCMQIPTLIDAIASRHDVPPLIKLTVVGASRNIPPIIDLSYDELGSKLVNFAKSKNVVMDFRVISSTHADGFAALIQYLGVHRLVTEALVINCHMMLHCIPDETLSATSTSSLRSLFLKALRSLNPTLVVLVEEDADLTPMDLVCRLRAAFNYMWIPYDTMDTFLQRGSEQRQWYEADMCWKIENVMAHEGVERVERLESKSRWEQRMRDAEFQGISFSDDAVSEVKAMLDEHAAAWGLKKEEQHLLLTWKGHNVVFASAWFLA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci371g0002 441 Pfam GRAS domain family 54 438 IPR005202 -
Prci371g0002 441 MobiDBLite consensus disorder prediction 1 26 - -
Prci371g0002 441 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 428 IPR005202 -
Prci371g0002 441 ProSiteProfiles GRAS family profile. 45 439 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci371g0002 38 438 GRAS Transcription Factor Family AT3G49950 60.988 3.73e-178 502
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci371g0002 GRAS 8.2e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci371g0002 - - pcin:129296651 856.67