Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci366g0004 ATGACCACCCTTACAACCATGGCTTCCTTTAATCTTCTTCCTTCTCTAGCTCATCTTCCTCTGCTAGCTACTTTATTTGTTACAGTTTTCCCCTTTCAAACGTCCATCAAAGTATCTTTTATGGCCCCTTTTAAATGCTCTGCAAAAATCAACACATGTAATGCCATGCTTTACCACGTAAACCATGGTCTTGACATGGAAGACATAGCCTCTCATTACTCCGTTAATTCATCCCAAATTCAACCCATAACACGGGGCACTAACCAAGATTACCTCATAACTGTTCCTTGTTCTTGTAAAACCGTCACTAACCTTAGGGGATATTTCTTCAACACAACTTACACAGTAGAGGAAGATCAGACCTATATGAATCTGTCAACCTTCTATTACAGTGGACAAGCCTGGTCTCCTACTGATAATGTGACCACGGGTGAAAACTTAACTATACATCTTCCCTGTGGATGCACAGACATTGATTCTCAAATCGTTGTGACATATACAGTCCAGCAGAATGATACAACAGCAGAAATAGCTAATATGCTATCATCTACACTTACTGGCATTCAGAACATGAATGAAGTTTTAGCTAATAGGCCTTCATTCATAGATGTGGGTTGGGTGTTATATGTTCCTAAGGAGCTCAACGGGATTCCATCTCCAAAAGGAAGTGGAAAGAAACTCAAGCATTCTATTATTATTGGCGTCTTAGTGGGTGTGACATTACTTTCTGTTATCACAATGATCATTCTAATTCTGCGGAGAAAAAGAGCCACTGAATCCAGCAAAAAAGACGCACAAGCTGTATCGAAAAGATCAACTTCAAAACCATTATCTAAAAGATCAATTTCCAATAGAAATATTTCCTTAAAGAACTATCAATTTCATATAGAAACTATAGAAGAAGTAACATCAATTGACTCGGAAAGACCAACAACGTTTTATCTTGAGGAGATTGAGGAGGCCATAAACAAAGAAAGTAAAATAATAGGAAAGGGCGGATATGGGACTGTATATTTTGGAATTTTAGGAGAGAAGGAGGTTGCTATAAAAGAAATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAACTCAAGGTCTTATGCAGGATCCATCATATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGATAACCTCTATTTGGTGTATGAGTATGTTTCAAAAGGATCTCTCAGCGACCATCTTCACGATCCATTTCTAAAAGGTCATGAACCTCTTTCATGGACTGCTAGAGCACAGATTGCTCTGGATGCTGCAAAAGGTCTTGAATACATACATGATTACACAAAAGCACGGCATGTGCATAGAGATATCAAGACTAGCAATATTCTTCTTGACAATAAACTCAGAGCCAAGATTGCAGATTTCGGACTAGTAAAGCTGTTAGAACGAACAAATGATGATGATTTTATAGCAACAAGGCTTGTTGGGACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAGGTGACCTCAAAAACCGATGTTTTTGCATTTGGAGTAGTTCTAGCAGAGCTAGTAACAGGGAAACCTGCTCTATTTCGTGAAAGCCAAGAAATCCCCAGAATGAGATCACTTATTTCTGTCATTAATGGAGTATTTGAAGCTGATGACCCAGAGAATGTTTTAGAAGATGTCATAGACAAAAACCTTCGAGATAGCTATCCTATGGAGGATGTCTTCAAGATGATAGAAATAGCTCAAAGATGCTTACGCGAAGAACCAATTGAGAGGCCAGAAATGAGGGAGATTGTGGTGATATTGTCACAGATTGTTATGTCCTCCACAGAGTGGGAAGCATCACTAGGTGGTGACAGTGAGGTCTTTAGCGGCATATTCACTGGAAGATGA 1884 0.3938 MTTLTTMASFNLLPSLAHLPLLATLFVTVFPFQTSIKVSFMAPFKCSAKINTCNAMLYHVNHGLDMEDIASHYSVNSSQIQPITRGTNQDYLITVPCSCKTVTNLRGYFFNTTYTVEEDQTYMNLSTFYYSGQAWSPTDNVTTGENLTIHLPCGCTDIDSQIVVTYTVQQNDTTAEIANMLSSTLTGIQNMNEVLANRPSFIDVGWVLYVPKELNGIPSPKGSGKKLKHSIIIGVLVGVTLLSVITMIILILRRKRATESSKKDAQAVSKRSTSKPLSKRSISNRNISLKNYQFHIETIEEVTSIDSERPTTFYLEEIEEAINKESKIIGKGGYGTVYFGILGEKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEDNLYLVYEYVSKGSLSDHLHDPFLKGHEPLSWTARAQIALDAAKGLEYIHDYTKARHVHRDIKTSNILLDNKLRAKIADFGLVKLLERTNDDDFIATRLVGTPGYLPPESVKELQVTSKTDVFAFGVVLAELVTGKPALFRESQEIPRMRSLISVINGVFEADDPENVLEDVIDKNLRDSYPMEDVFKMIEIAQRCLREEPIERPEMREIVVILSQIVMSSTEWEASLGGDSEVFSGIFTGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci366g0004 627 ProSitePatterns Protein kinases ATP-binding region signature. 329 350 IPR017441 GO:0005524
Prci366g0004 627 ProSiteProfiles LysM domain profile. 164 210 IPR018392 -
Prci366g0004 627 ProSiteProfiles Protein kinase domain profile. 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci366g0004 627 Gene3D Phosphorylase Kinase; domain 1 294 394 - -
Prci366g0004 627 Gene3D Transferase(Phosphotransferase) domain 1 395 615 - -
Prci366g0004 627 SUPERFAMILY LysM domain 164 211 IPR036779 -
Prci366g0004 627 FunFam PTI1-like tyrosine-protein kinase 3 395 613 - -
Prci366g0004 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 37 621 IPR044812 GO:0019199|GO:0045087
Prci366g0004 627 Pfam Protein kinase domain 325 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci366g0004 627 Gene3D LysM domain 158 215 IPR036779 -
Prci366g0004 627 SUPERFAMILY Protein kinase-like (PK-like) 311 599 IPR011009 -
Prci366g0004 627 SMART serkin_6 323 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci366g0004 627 Pfam LysM domain 166 211 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci366g0004 308 627 Receptor kinase-like Gene Family AT1G51940 51.064 1.68e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci366g0004 Pkinase 4.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci366g0004 - - gmx:100800907 818.15