Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci365g0008 ATGTGTGGAGGTGCTATCATCTCCGGCTTCGTCCCTCAGAAACTTAGTCTGAGGTCGACAGCTGACAACCTCGGGCCGGACTTCGAAACCTTCGCCGACCTCCTAGGTTTCTATCCCACCGGTCCTTCTTCCAAACACCAGAAACCAGCTGCTTCCCTCGATGATCATAAACTCCTTCCGATTCCAAACACCCCAGTGACATGTGAGAATAATAACAAAACTAACAATAATGACGACGACAACAACAAAACGTCGGAGAAGAAAAGCCGAGGAAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAACGGCCGTGGGGCAAGTGGGCCGCCGAGATAAGGGACCCGTACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACTGCCGAAGAAGCTGCCAGAGCCTACGACCAAGCCGCCAAGCGCATCCGTGGTGACAAAGCCAAGCTTAACTTCCCGCCGGCTCCTCCTCCTTCGGCTCCCGCGGAACCGCCCCAGAAGAAGCAGTGCCTCGTCGTCCCCGAGCCAAGCCTCCCCGGCCACAACGACGCCGTTCAGCTGAGCCAACAAATCTCAGGCCTCGGATCCTTCCTGGGTCTGGAAGACGACGAAAACAATACTACTATTGATGTTTCGCAGCCGATCGGCGGCGGCGGCATGCTGTCTGAGTGGGACCCGATGGACGATCTCTGGATGCTGAACGACGTCGTCATGCATCATCTGAACCATAACGGTCACTACTAG 747 0.5596 MCGGAIISGFVPQKLSLRSTADNLGPDFETFADLLGFYPTGPSSKHQKPAASLDDHKLLPIPNTPVTCENNNKTNNNDDDNNKTSEKKSRGRTRKNIYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPPAPPPSAPAEPPQKKQCLVVPEPSLPGHNDAVQLSQQISGLGSFLGLEDDENNTTIDVSQPIGGGGMLSEWDPMDDLWMLNDVVMHHLNHNGHY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci365g0008 248 CDD AP2 97 153 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 SMART rav1_2 97 160 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 Pfam AP2 domain 98 146 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 MobiDBLite consensus disorder prediction 42 96 - -
Prci365g0008 248 PANTHER DNA-BINDING DOMAIN 64 165 IPR044808 GO:0003700|GO:0009873
Prci365g0008 248 FunFam Ethylene-responsive transcription factor 2 96 155 - -
Prci365g0008 248 ProSiteProfiles AP2/ERF domain profile. 97 154 IPR001471 GO:0003700|GO:0006355
Prci365g0008 248 Gene3D AP2/ERF domain 97 155 IPR036955 GO:0003700|GO:0006355
Prci365g0008 248 MobiDBLite consensus disorder prediction 147 167 - -
Prci365g0008 248 MobiDBLite consensus disorder prediction 64 78 - -
Prci365g0008 248 SUPERFAMILY DNA-binding domain 97 154 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci365g0008 1 241 AP2-EREBP Transcription Factor Family AT3G16770 41.281 1.14e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci365g0008 AP2 7.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci365g0008 K09286 - mnt:21388719 201.445