Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci365g0007 ATGTGTGGAGGTGCTATCATCTCCGGCTTCGTCCCTCAGAAACTTAGTCTGAGGTCGACAGCTGACAACCTCGGGCCGGACTTCGAAACCTTCGCCGACCTCCTAGGTTTCTATCCCACCGGTCCTTCTTCCAAACACCAGAAACCAGCTGCTTCCCTCGATGATCATAAACTCCTTCCGATTCCAAACACCCCAGCAGTGACATGTGAGAATAATAACAAAACTAACAATAATGACGACGACAACAACAAAACGTCGGAGAAGAAAAGCCGAGGAAGGACTCGCAAGAACATTTACAGAGGAATCCGGCAACGGCCGTGGGGCAAGTGGGCCGCCGAGATAAGGGACCCGTACAAGGGCGTCCGAGTCTGGCTCGGCACCTTCAACACTGCCGAAGAAGCTGCCAGAGCCTACGACCAAGCCGCCAAGCGCATCCGTGGTGACAAAGCCAAGCTTAACTTCCCGCCGGCTCCTCCTCCTTCGGCTCCCGCGGAACCGCCCCAGAAGAAGCAGTGCCTCGTCGTCCCCGAGCCAAGCCTCCCCGGCCACAACGACGCCGTTCAGCTGAGCCAACAAATCTCAGGCCTCGGATCCTTCCTGGGTCTGGAAGACGACGAAAACAATACTACTATTGATGTTTCGCAGCCGATCGGCGGCGGCGGCATGCTGTCTGAGTGGGACCCGATGGACGATCTCTGGATGCTGAACGACGTCGTCATGCATCATCTGAACCATAACGGTCACTACTAG 750 0.56 MCGGAIISGFVPQKLSLRSTADNLGPDFETFADLLGFYPTGPSSKHQKPAASLDDHKLLPIPNTPAVTCENNNKTNNNDDDNNKTSEKKSRGRTRKNIYRGIRQRPWGKWAAEIRDPYKGVRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPPAPPPSAPAEPPQKKQCLVVPEPSLPGHNDAVQLSQQISGLGSFLGLEDDENNTTIDVSQPIGGGGMLSEWDPMDDLWMLNDVVMHHLNHNGHY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci365g0007 249 PRINTS Ethylene responsive element binding protein signature 99 110 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 PRINTS Ethylene responsive element binding protein signature 121 137 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 Gene3D AP2/ERF domain 98 156 IPR036955 GO:0003700|GO:0006355
Prci365g0007 249 MobiDBLite consensus disorder prediction 42 98 - -
Prci365g0007 249 MobiDBLite consensus disorder prediction 65 79 - -
Prci365g0007 249 SMART rav1_2 98 161 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 MobiDBLite consensus disorder prediction 148 169 - -
Prci365g0007 249 Pfam AP2 domain 99 147 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 SUPERFAMILY DNA-binding domain 98 155 IPR016177 GO:0003677
Prci365g0007 249 CDD AP2 98 154 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 ProSiteProfiles AP2/ERF domain profile. 98 155 IPR001471 GO:0003700|GO:0006355
Prci365g0007 249 FunFam Ethylene-responsive transcription factor 2 97 156 - -
Prci365g0007 249 PANTHER DNA-BINDING DOMAIN 66 166 IPR044808 GO:0003700|GO:0009873
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci365g0007 1 242 AP2-EREBP Transcription Factor Family AT3G16770 40.989 2.93e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci365g0007 AP2 7.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci365g0007 K09286 - mnt:21388719 202.601