Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci360g0005 ATGTCCTTCAACTACCTCAAATGGGTTCTTGAGTTCCTTCTCTACCACCCATTTTACAGCATGCGTGTTCATCATCATCAACCTCTGCTTCAAGAGTTTCATCAGATCGTTACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAACTGGAGATATGGCGTGCTGGTGGAGAAGAAGAAGAAGAAGTGGACTGTGCAGTGTGTCTGAGCAAGATTGGTGAAGGAGACGAAATTAGAGTACTGAGGTGTGAGCATGTTTTTCATAGGCTTTGTTTGAATCAATGGATTGGGTTCAGCAACTTTACTTGTCCTCTTTGCAGAGACTTTCTGGGTTGTGGGATTAGAACTGTACTCAGTGGTGAGAGAGGAATTAGAGCTAATCGTGTTCTTTTCTTCAAGTTTTCCTCATTCTCGTCTGATAATTCTGAGTCTCAGAACTGGTGGCTACGGTGA 450 0.4267 MSFNYLKWVLEFLLYHPFYSMRVHHHQPLLQEFHQIVTEEEEEEEEEELEIWRAGGEEEEEVDCAVCLSKIGEGDEIRVLRCEHVFHRLCLNQWIGFSNFTCPLCRDFLGCGIRTVLSGERGIRANRVLFFKFSSFSSDNSESQNWWLR 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci360g0005 149 SMART ring_2 64 105 IPR001841 -
Prci360g0005 149 ProSiteProfiles Zinc finger RING-type profile. 64 106 IPR001841 -
Prci360g0005 149 Pfam Ring finger domain 63 106 IPR001841 -
Prci360g0005 149 SUPERFAMILY RING/U-box 30 110 - -
Prci360g0005 149 Coils Coil 30 50 - -
Prci360g0005 149 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 109 IPR013083 -
Prci360g0005 149 PANTHER RING ZINC FINGER PROTEIN-RELATED 37 109 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci360g0005 52 109 C3H Transcription Factor Family AT1G15100 53.448 5.41e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci360g0005 K16282 - pcin:129296604 280.026