Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci357g0004 ATGGACGCATACTCTTCTGGAGAAGAAGTAGTCGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAACGATGGACAGAGGAGGAGCATGATAAGTTCCTAGAAGCGCTAAAGCTCTATGGAAGAGCATGGCAGCGCATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAGTTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAAGGTGTTCCAATCGGACAATCTATTGACATAGACATACCTCCTCCACGCCCCAAAAGAAAACCAAACAATCCTTATCCTCGGAAGACTAGTGCTTGTGCCCAGACATCACATGGTGGAGGAAAGAATGGAAAACTTGTGCCGGTTTCATCTTCACACTGCAAACCAGCACTGGACCTGGAGAAGGAACCACATCCAGAGGAGGCACCCTGTTCCTTAGTTACATCAGCAGACAAGAATTCAATGTCAGTGCCACTGAGAAGTCCATGCACCTTAAGGGAGTTCATACCCTCAGCAAAAGAATTGATAAGCCGGGATGAAACAGATGAATCTTTTGTCACCACTGAGCTAAAAGAAAATCAGAAGTTGGAAATAGGTGCTGAAGGGAAACGCACAGAACAGAGTAATGGCACAGGTAAAGCTTCCAAGTTGGAAGATTCTGATGCTTCACATGCAAAATCGGTTCAGAGTAAGAAAACAGATTATCTCAATTGTGCTTTGACAATAGAAGGGATGCAAGGAAATCATAACTACCCTAGACATGTCCATGTGCACGTTCTTGATGGGAAAATTGGAACAGCTGCATCAAATGCAAGTGGAAGTCAAAATAACTCAACACAATCTTCAATTCATCAATCATTTCCTGCTTATCCTCCCCCATTCCCACAAATTCACCAGAATCAAGATCACTACCAATCATTTCTTCAAATGTCCTCCACATTTTCAAGCCTTATTGTCTCCACCCTGCTTCAAAACCCTGCAGCACATGCTGCAGCAAGTTTTGCTGCTACGTTTTGGCCCTATGCAAATGTAGAAGCTTCTGCAGATTCTCCAGCATGCTTGCAAGGAGCCTTTCCATCTAGGCAAATTGGCTCTCCTCCAAATATGGCAGCTATTGCAGCTGCTACTGTGGCTGCTGCAACTGCATGGTGGGCAGCCCATGGACTTCTTCCTTTGTGTGCCCCTTTCCATTCTGCTTTTCCTTGTCCGCCATCAGCTGCAGTAGTTCCATCAACGGACAATGGTGAAATACCGGCAGCCAAAACAGAGCAAGGTGGTGAAACTACTGTTCGGACTCCCCTGCAAAATCAGGATCCAGAATATGCAGATGCTCTTCAAGCTCAACATTCAGCTTCTAAGTCACCAGCAATTTCTTCATCAGAGCCAGAGGAAAGGGGAGATGCTAAGATGAATGCTTCATCAAAGACTGATCATGAGAAGAGCAAAGCAAATTCTGAGCACCTTGACCCTAACAAAATGAAAGGCAGAAAACAGGTTGACCGTTCCTCATGTGGTTCTAATACCACCTCTAGCAGCGAGGTTGAGACAGACGCACTAGAGAAGGATGAGAAAGGGAAAGAGGAAAACAAAGAACCTGATGCAAACCGATTAGCTATTGATTCCAGAAATCGTCGTGCTAGAAGTGCCAGCTGCCTTCCTGATTCTTGGAAGGAGGTCTCTGAAGAGGGAAGGCTGGCCTTTCAGGCTCTCTTCTCAAGGGAGGTGTTGCCACAGAGCTTTTCTCCCCCACATGACTTGACAAATCCGGATCATCAGATGGAGAAAATTGAGGATAACAAGCATAATACGGATGATAAACTAGACAACAGCAAGAAACGCAGTTCTGACTGTAGAGGAGCGGAGAAAAATCTGTCATTCATTGAAAAACACAATGAGGAGGAGATACTGCTAACCATAGGGCTTGGACAAGGAAAGCTGAAGGCTAGTCGAACAGGGTTTAAACCTTACAAGAGATGTTCAATGGAAGTCAAGGAAAACAGGGTTGGAACTACTGGCAACCATGGTGAAGAGAAAGGTGCCAAGAAAATACGCTTGGAAGCGGAGGCTTCAACTTGA 2091 0.4495 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHDKFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQSIDIDIPPPRPKRKPNNPYPRKTSACAQTSHGGGKNGKLVPVSSSHCKPALDLEKEPHPEEAPCSLVTSADKNSMSVPLRSPCTLREFIPSAKELISRDETDESFVTTELKENQKLEIGAEGKRTEQSNGTGKASKLEDSDASHAKSVQSKKTDYLNCALTIEGMQGNHNYPRHVHVHVLDGKIGTAASNASGSQNNSTQSSIHQSFPAYPPPFPQIHQNQDHYQSFLQMSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANVEASADSPACLQGAFPSRQIGSPPNMAAIAAATVAAATAWWAAHGLLPLCAPFHSAFPCPPXSAAVVPSTDNGEIPAAKTEQGGETTVRTPLQNQDPEYADALQAQHSASKSPAISSSEPEERGDAKMNASSKTDHEKSKANSEHLDPNKMKGRKQVDRSSCGSNTTSSSEVETDALEKDEKGKEENKEPDANRLAIDSRNRRARSASCLPDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLTNPDHQMEKIEDNKHNTDDKLDNSKKRSSDCRGAEKNLSFIEKHNEEEILLTIGLGQGKLKASRTGFKPYKRCSMEVKENRVGTTGNHGEEKGAKKIRLEAEAST 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci357g0004 697 PANTHER SWI/SNF COMPLEX-RELATED 7 535 - -
Prci357g0004 697 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Prci357g0004 697 MobiDBLite consensus disorder prediction 272 292 - -
Prci357g0004 697 SMART sant 23 71 IPR001005 -
Prci357g0004 697 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Prci357g0004 697 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Prci357g0004 697 MobiDBLite consensus disorder prediction 85 150 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 191 233 - -
Prci357g0004 697 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Prci357g0004 697 MobiDBLite consensus disorder prediction 521 549 - -
Prci357g0004 697 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Prci357g0004 697 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Prci357g0004 697 MobiDBLite consensus disorder prediction 191 207 - -
Prci357g0004 697 Gene3D - 26 73 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 271 300 - -
Prci357g0004 697 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Prci357g0004 697 MobiDBLite consensus disorder prediction 594 622 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 506 520 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 409 563 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 577 622 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 466 505 - -
Prci357g0004 697 MobiDBLite consensus disorder prediction 671 697 - -
Prci357g0004 697 CDD SANT 26 69 IPR001005 -
Prci357g0004 697 MobiDBLite consensus disorder prediction 431 465 - -
Prci357g0004 697 Coils Coil 599 619 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci357g0004 Myb_DNA-binding 2.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci357g0004 K12133 - gmx:100271888 816.224