Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci355g0003 ATGTATTGGGTTTCCCAAAATCCTCCTCCAGCTCATTTGTTTCTAATTTCTGGTGATAAGGATTTTGCAGAAGTGTTACATCGTTTGAGAATGAATAACTACAATATCCTAATTGCTAGTATGGAGATTTCTAATGTTCTCTGCAGTGTAGCAACTATAGTGTGGCACTGGAATTTATTACTTAGAGGAGAAAATGTTAAGGGAAAACATTTCAATCATCCTCCTGATGGTTTGTATGGTACTTGGTATGGTCACCATGATGAACCTCTTGAAGACCCTTTCCCAGATGGAAAGAAATTTACATTTCCACGAATTGAGGAATTCCCAAAATCTATCTCAGGTTTGAACTTACGTCCAATTCCAAAGTTAGTTGTGAGGCAGGTTCATCAAATATTGAGTTCATATCCAAACGGCATCCCTTTAACATGTCTTCGAATGGAGTTGGAAAAAGCTGGTATTTCATTGCCTAAAGATTACTATGGATATAAAAAGTTTTCCCTTTTGCTTTTATCAGTGGCATGTGTACATCTTCAGGTTGTACCTGCAGGACTTATTGCACATTACATCTCCAAAAAATCTCCTAAACCCATTGCAAGCAGTTTTGTGTCATCAACAGAATTAGTTGATAATGAGGAGTTGAATCATGTGGCTACTTCAATGGCCTCATCTCATGAACTTAGTGGGGAAGATATTCCAGAGAAAGTCAAACAGGTTGCGGATGTGACCAAGACCAAGAGTCAATTGCCTCCTAAGGAGAATGAAATACTTTGCTCTACTGATGCAAGTCAAGCTGTTGCAGAAACTGCAACTTGTCACATTGTTGGAAGCACTGAATCTGTGGTTGCCAAAAGCAGCGGTGGACACACGGAAACTCACAGCAGTACTGTTAGCAAACGTCTAACTTTCATGGGTTGGATTGGAAGTTGGTGGCCATTCAGGAAAAAAGTTCAAAACACTCATAATTTGACCGCTCACAGGAATGAGATGGTTAGTAACGCTAAAGAGCCTGAGTTATTGAGTTCGCAACAGACAGTTAGTCATTATAAAGAGCCTGAGTTATCAAGTCTAAAACAGAGCTTCGGTCATTCTGAAGAGCTTCAGTCATTTGAACAGAGACAAATGGCGAGTCAATTTATGGAGGCTGGGTTGTCAGAACTGAGACAGACAGTGAATCATTCTGGAGAGCCTAAGTTATTTTCTTGTAGTTCCTTTTGGGAGGAAATGGAATCTTTTGTTTTCACCTCCAAAGGAGCAATTCTTGTCTTCCACTCAAGAAGCAGGAAGGATATAGCGCTTAGTTTTCAAAAGTATGGACCCCAGGTTCTCCGCTCGCTTAGTGAAAGTGATCTACTTCTATTGGTGGGTTTTTTAATATCTGAGAAGAAATGGCTGCAGGAAAGGCCTTCTGAGGCTTTTCCTTTCCGTGTCATTCCAGGCAGAACTAGACAAATTAACTTACGAGAATCATCAGAATGTCAAGTTGATAAAAAACAGAGTATTCTTCATACTGAGGCTTCTTCACCTGCCCCTCAAAAAGAGCACACTGAGAAGTCTAGCACTGAGAAGTCTAGAACTGACATGACAGCAGATGTTCAGAAACTTGTGAGTAAGATATTGAAGGACCACCCGAATGGGTGCAATATGGGTCTGATACGAACGCTCTTTCTCCAGAAGTATGGCTATCATTTAGATATTGGGAAGCTTGGTTATTCTAAGTTATCGCACCTCATCCAGAGTCTGCCTGGAGTGGACACAGAGGATGCATGTTTCTTTCCTGCAAATCGTGGCATACATGCTTCTGTTAATGAAACATCAATTCTCGAAGCACAAGAGACAAAACTAAGTGATGCAGACTACCACTATTCAGATAATGAGTTGCATGATTCATACTCTGAAGATGATTGGAAAGAATCCCCATGGGAGGAATTAGGACCTGTTTCTGTCAGAAATTCCAACGAGAGTGACCTGGAATCAAGACCAATGCAGAAACCAATAGAACTGAAGACTGCAATAGATCCTGATTATGGATATGATCTCTCTGATGATGATTGTTCTGAATCTGAAGGAGATAACTCCTGTTTAACTCAATCAGGAGTGAAAGAATCCCCATGGGAGGAATTAGGACCTGATTCTGTCAGCAATTCCAGCGAGAGTGACCTGGAATCAAGACCAAGGCAGAAACCAATGGAGCTGAAGACTGCAATAGATCCTGATTATGAATGTGTTCTCTCTGATGATGATTCTTCTGAATCTGGAGGAGATATATCCTGTTTAACTCGATCAGAAGAGAAAGAATCCCCATGGGAGGAATTAGGACCTGATTCTGTCAGCAATTCCAACGAGAGTGACCTGGAATCTAGACCAAGGCAGAAACCGATAGAGCTGAAGACTGCAATAGATGCTGATTATGAATGTGTTCTCTCTGATGATGATTCTTCTGAATCTAGAGGAGGTAACTCCCGTTTAACTCAATCAGAAGGGGAAGGCCAGCCAAAACTTAACGGGGAAGACAGTTCTTTGCAAACTCTGGACTCATTGTATGACAGTCAAGGAGAGGATAGTGTGAATCCAAACGAGGTCAATACAGAAGGCAATGGTCTGACTGATGGTTTAAATCCATCAAGGATTTCCACTCCAGGTACGAGTTCAGAAATTCATTCAGGGGGCTATAATGAGAAGCACATGACCCAGAAAAACTGTTCATTTGATGCTGAACCTGACTCATACAAGAATAAGGAGCTGTCGTAG 2748 0.4119 MYWVSQNPPPAHLFLISGDKDFAEVLHRLRMNNYNILIASMEISNVLCSVATIVWHWNLLLRGENVKGKHFNHPPDGLYGTWYGHHDEPLEDPFPDGKKFTFPRIEEFPKSISGLNLRPIPKLVVRQVHQILSSYPNGIPLTCLRMELEKAGISLPKDYYGYKKFSLLLLSVACVHLQVVPAGLIAHYISKKSPKPIASSFVSSTELVDNEELNHVATSMASSHELSGEDIPEKVKQVADVTKTKSQLPPKENEILCSTDASQAVAETATCHIVGSTESVVAKSSGGHTETHSSTVSKRLTFMGWIGSWWPFRKKVQNTHNLTAHRNEMVSNAKEPELLSSQQTVSHYKEPELSSLKQSFGHSEELQSFEQRQMASQFMEAGLSELRQTVNHSGEPKLFSCSSFWEEMESFVFTSKGAILVFHSRSRKDIALSFQKYGPQVLRSLSESDLLLLVGFLISEKKWLQERPSEAFPFRVIPGRTRQINLRESSECQVDKKQSILHTEASSPAPQKEHTEKSSTEKSRTDMTADVQKLVSKILKDHPNGCNMGLIRTLFLQKYGYHLDIGKLGYSKLSHLIQSLPGVDTEDACFFPANRGIHASVNETSILEAQETKLSDADYHYSDNELHDSYSEDDWKESPWEELGPVSVRNSNESDLESRPMQKPIELKTAIDPDYGYDLSDDDCSESEGDNSCLTQSGVKESPWEELGPDSVSNSSESDLESRPRQKPMELKTAIDPDYECVLSDDDSSESGGDISCLTRSEEKESPWEELGPDSVSNSNESDLESRPRQKPIELKTAIDADYECVLSDDDSSESRGGNSRLTQSEGEGQPKLNGEDSSLQTLDSLYDSQGEDSVNPNEVNTEGNGLTDGLNPSRISTPGTSSEIHSGGYNEKHMTQKNCSFDAEPDSYKNKELS 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci355g0003 915 MobiDBLite consensus disorder prediction 628 915 - -
Prci355g0003 915 MobiDBLite consensus disorder prediction 493 527 - -
Prci355g0003 915 Pfam NYN domain 1 51 IPR021139 GO:0004540
Prci355g0003 915 MobiDBLite consensus disorder prediction 817 904 - -
Prci355g0003 915 CDD LOTUS 121 172 - -
Prci355g0003 915 PANTHER LIMKAIN B LKAP 1 537 IPR024768 GO:0005777|GO:0010468
Prci355g0003 915 ProSiteProfiles OST-type HTH domain profile. 527 603 IPR025605 -
Prci355g0003 915 Pfam OST-HTH/LOTUS domain 123 172 IPR025605 -
Prci355g0003 915 Pfam OST-HTH/LOTUS domain 531 586 IPR025605 -
Prci355g0003 915 MobiDBLite consensus disorder prediction 509 527 - -
Prci355g0003 915 Gene3D - 527 588 IPR041966 -
Prci355g0003 915 ProSiteProfiles OST-type HTH domain profile. 120 191 IPR025605 -
Prci355g0003 915 CDD LOTUS 528 583 - -
Prci355g0003 915 MobiDBLite consensus disorder prediction 720 734 - -
Prci355g0003 915 MobiDBLite consensus disorder prediction 784 798 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci355g0003 1 63 C2H2 Transcription Factor Family AT5G61190 48.438 2.66e-12 68.9