Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci355g0002 ATGGTCAGCCGTATGCTTTCCAAAAATATCTTCATTTTCTCATCCATTTGTTCTTCATCATCTTTAGTTTGTCCTCTTCTCTTTCAAATTTGTCACTTCCCTAGCTTGTTGAATAACTCTTCATTACTTAGATGTCACTATCATGAATCCCGAAATATACCAGTTCCAGTATGGTGGGATTTTGAGAATTGTAATCCACCATCTGATGTGAATGTTTATAAAATTGCTCACTGCATAAGTGAGGCAGTTAGAGCCAAAGGGATCATGGGTCCCCTTCAAATTAAGGCATTTGGTGACGTTTATCAGCTCACAAGGACTAACCAGGAGGCTCTCGCATCTACTGGGATCAAAATCATCCATGTTCCTAAAGGTGGAAAGAATAGTGCCGATAGATCTCTTCTAATTGACCTTATGTATTGGGTTTCCCAAAATCCTCCTCCAGCTCATTTGTTTCTAATTTCTGGTGATAAGGATTTTGCAGAAGTGTTACATCGTTTGAGAATGAATAACTACAATATCCTAATTGCTAGTATGGAGATTTCTAATGTTCTCTGCAGTGTAGCAACTATAGTGTGGCACTGGAATTTATTACTTAGAGGAGAAAATGTTAAGGGAAAACATTTCAATCATCCTCCTGATGGTTTGTATGGTACTTGGTATGGTCACCATGATGAACCTCTTGAAGACCCTTTCCCAGATGGAAAGAAATTTACATTTCCACGAATTGAGGAATTCCCAAAATCTATCTCAGGTTTGAACTTACGTCCAATTCCAAAGTTAGTTGTGAGGCAGGTTCATCAAATATTGAGTTCATATCCAAACGGCATCCCTTTAACATGTCTTCGAATGGAGTTGGAAAAAGCTGGTATTTCATTGCCTAAAGATTACTATGGATATAAAAAGTTTTCCCTTTTGCTTTTATCAGTGGCATGTGTACATCTTCAGGTTGTACCTGCAGGACTTATTGCACATTACATCTCCAAAAAATCTCCTAAACCCATTGCAAGCAGTTTTGTGTCATCAACAGAATTAGTTGATAATGAGGAGTTGAATCATGTGGCTACTTCAATGGCCTCATCTCATGAACTTAGTGGGGAAGATATTCCAGAGAAAGTCAAACAGGTTGCGGATGTGACCAAGACCAAGAGTCAATTGCCTCCTAAGGAGAATGAAATACTTTGCTCTACTGATGCAAGTCAAGCTGTTGCAGAAACTGCAACTTGTCACATTGTTGGAAGCACTGAATCTGTGGTTGCCAAAAGCAGCGGTGGACACACGGAAACTCACAGCAGTACTGTTAGCAAACGTCTAACTTTCATGGGTTGGATTGGAAGTTGGTGGCCATTCAGGAAAAAAGTTCAAAACACTCATAATTTGACCGCTCACAGGAATGAGATGGTTAGTAACGCTAAAGAGCCTGAGTTATTGAGTTCGCAACAGACAGTTAGTCATTATAAAGAGCCTGAGTTATCAAGTCTAAAACAGAGCTTCGGTCATTCTGAAGAGCTTCAGTCATTTGAACAGAGACAAATGGCGAGTCAATTTATGGAGGCTGGGTTGTCAGAACTGAGACAGACAGTGAATCATTCTGGAGAGCCTAAGTTATTTTCTTGTAGTTCCTTTTGGGAGGAAATGGAATCTTTTGTTTTCACCTCCAAAGGAGCAATTCTTGTCTTCCACTCAAGAAGCAGGAAGGATATAGCGCTTAGTTTTCAAAAGTATGGACCCCAGGTTCTCCGCTCGCTTAGTGAAAGTGATCTACTTCTATTGGTGGGTTTTTTAATATCTGAGAAGAAATGGCTGCAGGAAAGGCCTTCTGAGGCTTTTCCTTTCCGTGTCATTCCAGGCAGAACTAGACAAATTAACTTACGAGAATCATCAGAATGTCAAGTTGATAAAAAACAGAGTATTCTTCATACTGAGGCTTCTTCACCTGCCCCTCAAAAAGAGCACACTGAGAAGTCTAGCACTGAGAAGTCTAGAACTGACATGACAGCAGATGTTCAGAAACTTGTGAGTAAGATATTGAAGGACCACCCGAATGGGTGCAATATGGGTCTGATACGAACGCTCTTTCTCCAGAAGTATGGCTATCATTTAGATATTGGGAAGCTTGGTTATTCTAAGTTATCGCACCTCATCCAGAGTCTGCCTGGAGTGGACACAGAGGATGCATGTTTCTTTCCTGCAAATCGTGGCATACATGCTTCTGTTAATGAAACATCAATTCTCGAAGCACAAGAGACAAAACTAAGTGATGCAGACTACCACTATTCAGATAATGAGTTGCATGATTCATACTCTGAAGATGATTGGAAAGAATCCCCATGGGAGGAATTAGGACCTGTTTCTGTCAGAAATTCCAACGAGAGTGACCTGGAATCAAGACCAATGCAGAAACCAATAGAACTGAAGACTGCAATAGATCCTGATTATGGATATGATCTCTCTGATGATGATTGTTCTGAATCTGAAGGAGATAACTCCTGTTTAACTCAATCAGGAGTGAAAGAATCCCCATGGGAGGAATTAGGACCTGATTCTGTCAGCAATTCCAGCGAGAGTGACCTGGAATCAAGACCAAGGCAGAAACCAATGGAGCTGAAGACTGCAATAGATCCTGATTATGAATGTGTTCTCTCTGATGATGATTCTTCTGAATCTGGAGGAGATATATCCTGTTTAACTCGATCAGAAGAGAAAGAATCCCCATGGGAGGAATTAGGACCTGATTCTGTCAGCAATTCCAACGAGAGTGACCTGGAATCTAGACCAAGGCAGAAACCGATAGAGCTGAAGACTGCAATAGATGCTGATTATGAATGTGTTCTCTCTGATGATGATTCTTCTGAATCTAGAGGAGGTAACTCCCGTTTAACTCAATCAGAAGGGGAAGGCCAGCCAAAACTTAACGGGGAAGACAGTTCTTTGCAAACTCTGGACTCATTGTATGACAGTCAAGGAGAGGATAGTGTGAATCCAAACGAGGTCAATACAGAAGGCAATGGTCTGACTGATGGTTTAAATCCATCAAGGATTTCCACTCCAGGTACGAGTTCAGAAATTCATTCAGGGGGCTATAATGAGAAGCACATGACCCAGAAAAACTGTTCATTTGATGCTGAACCTGACTCATACAAGAATAAGGAGCTGTCGTAG 3159 0.4093 MVSRMLSKNIFIFSSICSSSSLVCPLLFQICHFPSLLNNSSLLRCHYHESRNIPVPVWWDFENCNPPSDVNVYKIAHCISEAVRAKGIMGPLQIKAFGDVYQLTRTNQEALASTGIKIIHVPKGGKNSADRSLLIDLMYWVSQNPPPAHLFLISGDKDFAEVLHRLRMNNYNILIASMEISNVLCSVATIVWHWNLLLRGENVKGKHFNHPPDGLYGTWYGHHDEPLEDPFPDGKKFTFPRIEEFPKSISGLNLRPIPKLVVRQVHQILSSYPNGIPLTCLRMELEKAGISLPKDYYGYKKFSLLLLSVACVHLQVVPAGLIAHYISKKSPKPIASSFVSSTELVDNEELNHVATSMASSHELSGEDIPEKVKQVADVTKTKSQLPPKENEILCSTDASQAVAETATCHIVGSTESVVAKSSGGHTETHSSTVSKRLTFMGWIGSWWPFRKKVQNTHNLTAHRNEMVSNAKEPELLSSQQTVSHYKEPELSSLKQSFGHSEELQSFEQRQMASQFMEAGLSELRQTVNHSGEPKLFSCSSFWEEMESFVFTSKGAILVFHSRSRKDIALSFQKYGPQVLRSLSESDLLLLVGFLISEKKWLQERPSEAFPFRVIPGRTRQINLRESSECQVDKKQSILHTEASSPAPQKEHTEKSSTEKSRTDMTADVQKLVSKILKDHPNGCNMGLIRTLFLQKYGYHLDIGKLGYSKLSHLIQSLPGVDTEDACFFPANRGIHASVNETSILEAQETKLSDADYHYSDNELHDSYSEDDWKESPWEELGPVSVRNSNESDLESRPMQKPIELKTAIDPDYGYDLSDDDCSESEGDNSCLTQSGVKESPWEELGPDSVSNSSESDLESRPRQKPMELKTAIDPDYECVLSDDDSSESGGDISCLTRSEEKESPWEELGPDSVSNSNESDLESRPRQKPIELKTAIDADYECVLSDDDSSESRGGNSRLTQSEGEGQPKLNGEDSSLQTLDSLYDSQGEDSVNPNEVNTEGNGLTDGLNPSRISTPGTSSEIHSGGYNEKHMTQKNCSFDAEPDSYKNKELS 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci355g0002 1052 MobiDBLite consensus disorder prediction 765 1052 - -
Prci355g0002 1052 Pfam NYN domain 55 188 IPR021139 GO:0004540
Prci355g0002 1052 Gene3D - 50 195 - -
Prci355g0002 1052 CDD LOTUS 665 720 - -
Prci355g0002 1052 CDD PIN_limkain_b1_N_like 54 177 - -
Prci355g0002 1052 MobiDBLite consensus disorder prediction 857 871 - -
Prci355g0002 1052 ProSiteProfiles OST-type HTH domain profile. 257 328 IPR025605 -
Prci355g0002 1052 MobiDBLite consensus disorder prediction 921 935 - -
Prci355g0002 1052 MobiDBLite consensus disorder prediction 646 664 - -
Prci355g0002 1052 Gene3D - 664 725 IPR041966 -
Prci355g0002 1052 Pfam OST-HTH/LOTUS domain 260 309 IPR025605 -
Prci355g0002 1052 Pfam OST-HTH/LOTUS domain 668 723 IPR025605 -
Prci355g0002 1052 MobiDBLite consensus disorder prediction 954 1041 - -
Prci355g0002 1052 CDD LOTUS 258 309 - -
Prci355g0002 1052 ProSiteProfiles OST-type HTH domain profile. 664 740 IPR025605 -
Prci355g0002 1052 MobiDBLite consensus disorder prediction 630 664 - -
Prci355g0002 1052 PANTHER LIMKAIN B LKAP 46 674 IPR024768 GO:0005777|GO:0010468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci355g0002 57 200 C2H2 Transcription Factor Family AT5G61190 42.069 5.71e-33 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci355g0002 - - pcin:129296579 2080.83