Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci350g0001 ATGGGTGCTCGTTGCTCTAAGTTCTCCCTCTGCTGGTTCCATTCCCACCTCAAACCTTCCGTCCTTGAATCCTCCGACCTGGAAAATGGAGGGAAAAATGAGGGAGAAAGGTGGCCCAGTTTTGAGGAGTTCAACTTGGAACAATTGAAGGTTGCCACAAATGGTTTCTCCTCCGAAAACATAGTGTCGGAGCACGGTGAAAAAGCTCCCAATGTCGTTTACAAAGGGAAGCTCGAGGATGGTCATATGATCGCCATTAAACGCTTCAACAAATTTGCTTGGCCTGATTCACGCCAATTCCTCGAGGAAGCTAAGCAAGTGGGGAGTCTGAGAAGTGAGAGATTAGCCAACTTGATTGGCTATTGCTATGAAGGAGACGAAAGGCTGCTGGTAGCAGAGTTCATGCCACATGAAACTCTGGCAAAGCATCTCTTTCACTGGGAGGCACAACCCATGAAATGGGCAATGAGGTTGAGGGTGGCCTTGTACTTGGCTCAAGCTCTAGAGTACTGCAGCAGTAAAGGAAGGGCTTTATATCATGATCTCAATGCCTACAGGATCTTGTTTGATCAGGATGGTAATCCGAGGTTGTCTTGCTTTGGGCTCATGAAGAACAGCAGAGATGGCAAGAGTTACAGTACAAACTTGGCATTTACACCACCTGAGTACTTGAGAACAGGCAGAGTGACACCAGAGAGTGTAGTTTACAGTTTTGGAACTTTGTTGCTTGATCTTCTGAGCGGCAAACATATTCCCCCGAGCCATGCACTTGATCTGATCCGCGGCAAAAACTTTTTGATGTTAATGGATTCTGCCTTAGAAGGTCACTTTTCAAAGGAGGATGGAACTGAGTTGGTGCGGTTCGCTTCTCGTTGTTTACAGTATGAAGCTCGTGAGAGACCAAATGCAAAGTCTCTTGTTGCATCTCTAATGTCACTTCAGAAAGAAACTGAGGTCCCCTCCTATATTTTGATGGGTATTCGGCATGAAGCTGCATCCTCAAAAAAGCCATCACTGACACCTATGGGTGAAGCATGTTTGAGACTGGATCTTACTGCCATACATGAGATATTGGAGAAGATTGGATACAAGGATGATGAGGGATTCGCCAATGAGCTTTCATTTCAATTATGGACCAGTCAAATGCAGGAGACCCTGAACTGGAAGAAGCATGGAGATACTGCTTTCCGGGCCAAGGACTTTGTCACTGCCATTGACCGCTACACGCAATTCATAGATGGAGGGACCATGGTCTCGCCTACTGTGTATGCAAGACGCTGCTTGTCTTATTTGATGAAGGGGTTGGCACAAGAAGCTCTTGGGGATGCAATGCAAGCCCAGGTGGTATCACCCGAGTGGCCTACTTCTTTGTATCTTCAAGCAGCTTGTCTTTTCAGCCTTGGAATGGAGAATGATGCCCAAGAAACTCTCAGAGATGGGACAAACATGGAAGCCAGAAAGAACAAAATTTGA 1473 0.4637 MGARCSKFSLCWFHSHLKPSVLESSDLENGGKNEGERWPSFEEFNLEQLKVATNGFSSENIVSEHGEKAPNVVYKGKLEDGHMIAIKRFNKFAWPDSRQFLEEAKQVGSLRSERLANLIGYCYEGDERLLVAEFMPHETLAKHLFHWEAQPMKWAMRLRVALYLAQALEYCSSKGRALYHDLNAYRILFDQDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTPESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLMDSALEGHFSKEDGTELVRFASRCLQYEARERPNAKSLVASLMSLQKETEVPSYILMGIRHEAASSKKPSLTPMGEACLRLDLTAIHEILEKIGYKDDEGFANELSFQLWTSQMQETLNWKKHGDTAFRAKDFVTAIDRYTQFIDGGTMVSPTVYARRCLSYLMKGLAQEALGDAMQAQVVSPEWPTSLYLQAACLFSLGMENDAQETLRDGTNMEARKNKI 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci350g0001 490 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Prci350g0001 490 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Prci350g0001 490 SUPERFAMILY Protein kinase-like (PK-like) 36 320 IPR011009 -
Prci350g0001 490 Gene3D Tetratricopeptide repeat domain 382 490 IPR011990 GO:0005515
Prci350g0001 490 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Prci350g0001 490 Pfam Protein tyrosine and serine/threonine kinase 72 310 IPR001245 GO:0004672|GO:0006468
Prci350g0001 490 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 20 489 IPR045845 GO:0004672|GO:0009742
Prci350g0001 490 FunFam probable serine/threonine-protein kinase At4g35230 383 490 - -
Prci350g0001 490 ProSiteProfiles Protein kinase domain profile. 59 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci350g0001 490 SUPERFAMILY TPR-like 386 487 IPR011990 GO:0005515
Prci350g0001 490 Gene3D Phosphorylase Kinase; domain 1 31 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci350g0001 19 310 Glycoside Hydrolase AT3G07070 33.438 6.04e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Prci350g0001 PK_Tyr_Ser-Thr 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci350g0001 - - gmx:100814477 914.45