Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci34g0004 ATGGCAGCGGAGATATCATTTTCCTCTTCCTCTTCCTTCAGCTATGAATGGACTTATGATGTATTTCTCAATTTTAGAGGCGAAGATACTCGCTTTGATTTTGTCAGAAATCTTTATAATGCTCTCAATCAAAAGGGCATTCATACCTTTATGGATGACGAGGGGCTTAGAAGAGGAGAAAAAATTACTCCATCACTTGTCAAAGCAATCCGAGAATCAAGAATTGCCATTGCTATTTTCTCCAGAAACTATGCTTCCTCTACCTTTTGTTTAGATGAACTTGTTCAGATCCTTGAATGTATAAACTCAAAGGGACGATTGGTTTTGCCTATTTTTTATAATGTAGAACCGTCTGAAGTACGACATCAAAAAGAGAATTATGCAGAAGCATTCGCAAAGCATGAGACAAGGTTCGAGAATTGCGACGAGGCGAAGGTGCAAAAATGGAGGCAGGCTTTGCGAGATGTTGCTAATATCTCTGGTTTTGTTTTTAGACCTGGGCAAGAATATGAATGCCATTTTATTGAAAGGATCGTGAAAGATGTCTCTATGAGGATCAACCGCAAACCTTTACACATTGCTGATTACCCAGTTGGAATCGAATCTCGAGTGCAGCAAGTCCAATCTCTTTTGGATGTTAACTCTAATGAGGGAGTCCAAATGGTAGGGATTTGGGGCACTGGAGGAATAGGCAAATCAACAATTGCTCGAGCAGTATGCAATTCAATTGCTGACCTATTTGAAGGCTTCTGTTTTCTTGCTAATGTTAGAGAAAACTCACAAAAGCATGGGTTAGTGCATCTCCAAGAAATACTTTTTTCTGAAGTGATGATGGATGAAAATATCACCGTAAGATATGTCAATAAAGGAATTCCAATAATAAAACACAAGCTCCACAGAAAGAAGGTTCTAATAGTTCTTGATGATGTTGATGAACTAGACCAATTGCAAGCAATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGCAGAATCATTATAACAACAAGGGATACGCATTTGCTAGCAAGACATGGCGTTGATAGAATTCATGAGGTTGAGAGTTTAAATCAAGAAGAAGCTCTTGAACTGCTCACTTGGAATGCCTTTAAACAAAATAGAGCCGAGCAAAGATACTTGGATAATTTAAATAATATTATACTATATGCCTCTGGTCTTCCATTGGCTTTGGAAATTATAGGTTCCAGCTTGTTTGGTATGGGAGTAGAATATTGGAATTCTGCACTAGAAAACTGGCGAGTAACTCCCAATCAAAAGATCCAACAAGTACTCAAAATAAGTTATGATGCTTTGGAAGAACATGAGCAGGAAATTTTTCTTGATATTGCTTGTTGCTTTAAAGGAGACACATTGGAATATGTCACAAGCACTCTACTGGCTTCTCATGGTAGATGCCCAAAATATGCTATTAAGGTGTTAGTTGATAGGTGTCTCATAAAGATTTGTCGTGAGGATAAATTAAGCCTTTGGCCTTCCGATAGCATTGTGACAATGCATGACTTGATTCAGGATATGGGGAAGGAAATTGTTCGGCACCAATCACCAAATGAGCCTGGAAAACGCTCTAGGTTGTGGTTCACCAAAGACATTGTTTCCGTTTTAGAAGAGAACGAGGGAACTAAGAAGATTGAAGTCATAAATCTGCACATGCTGGGAGATGAAGAGGTTGATTGGGATGGAATGGCCTTCAAAAAGATGTCAAACCTTAAGATGCTTATCATTAGAAATGCACAATTTTCCACAGCTCCCAAGTATCTCCCAAGTAGTTTAAGAGTGCTGGAATGGAAGGGATATCCTTATTCATCTCTACCTTGTGATTTCAATCCCAAGCAACTAGTTATCTTAAGGGTGCCTGAAAGTCGCCTGACACTGAATACACCACTCAAGAAGTTCCGGTCTTTAACTATCATGAATTTGAGTCGCTGTGAATTGTTAAGAGAAGTTCCTGACTTATCTGAAGCCCCAAATTTGATTGAACTATGTCTGGATGGCTGCATAAATTTAACTAATGTTCATGCTTCCGTTGGTTCTCTTGATAAACTTAAGAGGTTAAGTGCTTATTATTGCAAGAAGCTCAAGAACTTTCCAAGCATCTTTTTAAGGTCTCTTGAATTTCTTGACCTCTCAGAGTGCGAGAGCCTTCAGACATTTCCAGAAATATTAGGAACCATGGAAAATTTAAGAGAAATGAATCTAACATATAGTGGCATAGAAATATTGCCATTGTCAATCAAAAACCTCATTGGTTTAAAAGAATTAAATCTTACAAGGAAGTTACGGCATTGGGGAGTTAAAGTAGATGACATTTCATACTCACATTTGAAGTCGGAGTCTCTAAACATATTACTCAGTCAGGCATCTCACGAGGTTGATGGCTTCAAGTTTATAATAAGAGGAGACAGACCTCCAAAATGGCTTGACCATTATGCTTTATTAGATTCAGTGTCTTTCTGGTTCCGAAGAAAGCAACTTCCCAACGTGGCTGTGTGTTTTGCAGTATCAGCATCTAGAGATGCACGTCACGCCCCATCTATTATCCTAAATTTTAACGTCCAAATCAATGGCAAATCTTTTGACTCTCCTGCAAAACTTGATCATTATATTCCATGTCAAAACTTCTTTTTGGTGGATTTGCAAAACCTGATTCCTATGGATCAACTCAAGAATGGAGTTTTGCAAGATGAATGGAACCATGTGAAGGTTTCTTGCAACATGTTTTCCATAACTTGTGGAATTGGTATGCAACCTCCACTAGATGATGCAGTCTATACAAGATGGAGCGGAATATATGTGCACAAGCAGATATCTAGAATGGAAGATATCAGATTCTCGAATCCTAATGTGGAGTCTTTTTTCACTGAGTTCTCAGAAGGATCTTCTTCAAATCTCAGTGCCTTCGAGGAATTAATCCAAAATTGGATGAATCTATTCGTGCAGGGAGGAAGCTTAGACGAATTTAATGATGATTTTATTAATTATGGACGCGTGATATAA 3015 0.3844 MAAEISFSSSSSFSYEWTYDVFLNFRGEDTRFDFVRNLYNALNQKGIHTFMDDEGLRRGEKITPSLVKAIRESRIAIAIFSRNYASSTFCLDELVQILECINSKGRLVLPIFYNVEPSEVRHQKENYAEAFAKHETRFENCDEAKVQKWRQALRDVANISGFVFRPGQEYECHFIERIVKDVSMRINRKPLHIADYPVGIESRVQQVQSLLDVNSNEGVQMVGIWGTGGIGKSTIARAVCNSIADLFEGFCFLANVRENSQKHGLVHLQEILFSEVMMDENITVRYVNKGIPIIKHKLHRKKVLIVLDDVDELDQLQAIAGGLDWFGSGSRIIITTRDTHLLARHGVDRIHEVESLNQEEALELLTWNAFKQNRAEQRYLDNLNNIILYASGLPLALEIIGSSLFGMGVEYWNSALENWRVTPNQKIQQVLKISYDALEEHEQEIFLDIACCFKGDTLEYVTSTLLASHGRCPKYAIKVLVDRCLIKICREDKLSLWPSDSIVTMHDLIQDMGKEIVRHQSPNEPGKRSRLWFTKDIVSVLEENEGTKKIEVINLHMLGDEEVDWDGMAFKKMSNLKMLIIRNAQFSTAPKYLPSSLRVLEWKGYPYSSLPCDFNPKQLVILRVPESRLTLNTPLKKFRSLTIMNLSRCELLREVPDLSEAPNLIELCLDGCINLTNVHASVGSLDKLKRLSAYYCKKLKNFPSIFLRSLEFLDLSECESLQTFPEILGTMENLREMNLTYSGIEILPLSIKNLIGLKELNLTRKLRHWGVKVDDISYSHLKSESLNILLSQASHEVDGFKFIIRGDRPPKWLDHYALLDSVSFWFRRKQLPNVAVCFAVSASRDARHAPSIILNFNVQINGKSFDSPAKLDHYIPCQNFFLVDLQNLIPMDQLKNGVLQDEWNHVKVSCNMFSITCGIGMQPPLDDAVYTRWSGIYVHKQISRMEDIRFSNPNVESFFTEFSEGSSSNLSAFEELIQNWMNLFVQGGSLDEFNDDFINYGRVI 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci34g0004 1004 SUPERFAMILY "Winged helix" DNA-binding domain 426 542 IPR036390 -
Prci34g0004 1004 SMART till_3 18 159 IPR000157 GO:0007165
Prci34g0004 1004 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 763 IPR044974 GO:0006952
Prci34g0004 1004 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 162 IPR035897 -
Prci34g0004 1004 Gene3D - 185 349 IPR027417 -
Prci34g0004 1004 Gene3D - 355 439 IPR042197 -
Prci34g0004 1004 ProSiteProfiles TIR domain profile. 17 186 IPR000157 GO:0007165
Prci34g0004 1004 SMART AAA_5 218 357 IPR003593 GO:0016887
Prci34g0004 1004 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 188 - -
Prci34g0004 1004 Pfam NB-ARC domain 201 423 IPR002182 GO:0043531
Prci34g0004 1004 Gene3D Ribonuclease Inhibitor 706 786 IPR032675 -
Prci34g0004 1004 Gene3D Ribonuclease Inhibitor 567 705 IPR032675 -
Prci34g0004 1004 PRINTS Disease resistance protein signature 390 404 - -
Prci34g0004 1004 PRINTS Disease resistance protein signature 221 236 - -
Prci34g0004 1004 PRINTS Disease resistance protein signature 297 311 - -
Prci34g0004 1004 PRINTS Disease resistance protein signature 705 721 - -
Prci34g0004 1004 Gene3D - 12 184 IPR035897 -
Prci34g0004 1004 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 449 IPR027417 -
Prci34g0004 1004 SUPERFAMILY L domain-like 521 765 - -
Prci34g0004 1004 Pfam TIR domain 19 185 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci34g0004 13 835 WRKY Transcription Factor Family AT4G12020 30.886 1.25e-88 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci34g0004 - - pcin:129295008 1993.78