Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci347g0004 ATGGAAGGAGGTTTCGGCCAAAACTCTGTTCCTTCTTCAACTTCTTTTGACAAGTTCACGATTTTGGATGTTAAGCCTCTGCGTTGCTTGCTGCCAGTGTTCCCTATGTCATCTCAAGGTCCTTCTGGGTTCGCTCCTTTTTTCCCCTTTGGTGGTCCTCAAGGACCTCAAGCATGGACCGATCTCAACCAGCATGCTCCTCCCTCTGGAGAGACACCAGATTTTCTAATGCCTACTCCAATCCGTTCATTCAGAGGCCCTATAGACAATACTCCATCAAAACGTGGAGCACCACGTGGGAGCAGGTCAAAATCATCCCAAAGAAAGGCCAAGAAGATCCAAGTATCACAGGTGGATTTAAGTTCTGTAGTTGGCATTAGCCCAGCCCAACAAACTGATGGTAACTTGGAAGTTGTTAGTCTTGTACTCATGGAGTTTGATGCGCTTCGAAGAAGAATTAGCCAACTTGAAGATGCCAGGGAATTCGCTTCAGGATTTACCAAGCGTGGAGATTTAAAAGCTGGCAATATATTGATGACCAAGGGCATTCGAACAAACATGAAAAAGAGAGTAGGTGCAGTTCCTGGGGTTGAGATCGGGGACATTTTCTTTTTCAGAATGGAATTGTGTGTTGTGGGTATACATGCTCAGTCCATGGGTGGGATTGACTACATGAGCATCAAGGGTGGGTTTGAGGAAGAACCTCTGGCTGTAAGCATTGTTGCATCAGGATATTATGATGACAATGCAGATGATGACGATGTCTTAATTTATAGTGGACAGAGTGGGAACTTTGGCAAGAAAGAAAAGGTGGTGGCTGATCAGAAGCTTCAAAGGGGTAACCTTGCTCTGGAAAGAAGTTCACGACGGCACAATGAAGTAAGAGTCATCCGGGGCATGAGTGATGCTGCAAATCCAAATTTAAAAGTCTATGTCTATGATGGTCTGTACAAAATTCAAGATTCATGGATAGAAAAGGGGAAAGATGGCAGTGGTGTATTCAAGTACAAGTTGGTGAGAATGCCTGGACAGGTTAGTGCTTTTTCTGTTTGGAAATCAGTTCAGAAGTGGAAGACAGACCGTTCTTCAAGGACTGGACTTATTTTCTCAGATCTCTCTTTAGGAGCTGAGAGTATTCCTGTATCACTTGTCAATGGTGTTGACCATGATAGATTGCCTGGTGGTTTCACTTATTTTCATTCCCTTAGATATACAAAACCGTTCAGTTTAATGCAGTCTTCTAATGGCTGTGACTGTACAAAAGCATGTGTCCCTGGTGATCTGAATTGCTCTTGTATTCGGAGAAATGAAGGTGATTTTCCATATATTGGCAATGGCATTCTAGTGAGTCGTAGGCCATTAATTCATGAATGTGGCCCCACATGTCGTTGTTTTCCTAACTGCAAAAATAGAGTATCCCAGATGGGCTTGAAGCACTCCTTGGAAGTATTCAAAACAAGAGATAGGGGATGGGGTCTACGATCATTGGATCCTATTCGTGCTGGTTCTTTTGTTTGTGAATATGCTGGAGAAGTTATTGACAAGGGAAACTTAAATCAGAATGAGGAGTTAGCAATTAAAGATGAGTATGCTTTTAATACTAACCGTATATATTCTCCATTTAAGTGGAATCATACGCCTCAGTTATTGGAAGATGTGATTTCAAATGACTCTTGTGAGGATTATGACATTCCATCTCCGCTAATTATAAGTGCTAAAGAGTTTGGAAATGTTGCTAGATTCATGAATCATAGCTGCTCCCCAAATGTTTTCTGGCAGCCAGTTGTTTATGAAGAAAACAATCAATCGTTCCTTCATATTGCATTTTTCTCTCTCAGACATATTCCACCAATGACAGAGTTGACATATGATTATGGGATTTCCCGTTCTGATTATGCTAAGGGGAGCAGAATACCCAGAGGTAGAAAACAATGCTTATGTGGATCGTCGAAGTGCAGTGGTTCTTTTGGTTGA 1974 0.421 MEGGFGQNSVPSSTSFDKFTILDVKPLRCLLPVFPMSSQGPSGFAPFFPFGGPQGPQAWTDLNQHAPPSGETPDFLMPTPIRSFRGPIDNTPSKRGAPRGSRSKSSQRKAKKIQVSQVDLSSVVGISPAQQTDGNLEVVSLVLMEFDALRRRISQLEDAREFASGFTKRGDLKAGNILMTKGIRTNMKKRVGAVPGVEIGDIFFFRMELCVVGIHAQSMGGIDYMSIKGGFEEEPLAVSIVASGYYDDNADDDDVLIYSGQSGNFGKKEKVVADQKLQRGNLALERSSRRHNEVRVIRGMSDAANPNLKVYVYDGLYKIQDSWIEKGKDGSGVFKYKLVRMPGQVSAFSVWKSVQKWKTDRSSRTGLIFSDLSLGAESIPVSLVNGVDHDRLPGGFTYFHSLRYTKPFSLMQSSNGCDCTKACVPGDLNCSCIRRNEGDFPYIGNGILVSRRPLIHECGPTCRCFPNCKNRVSQMGLKHSLEVFKTRDRGWGLRSLDPIRAGSFVCEYAGEVIDKGNLNQNEELAIKDEYAFNTNRIYSPFKWNHTPQLLEDVISNDSCEDYDIPSPLIISAKEFGNVARFMNHSCSPNVFWQPVVYEENNQSFLHIAFFSLRHIPPMTELTYDYGISRSDYAKGSRIPRGRKQCLCGSSKCSGSFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci347g0004 657 SMART set_7 479 632 IPR001214 GO:0005515
Prci347g0004 657 ProSiteProfiles YDG domain profile. 192 340 IPR003105 -
Prci347g0004 657 SUPERFAMILY SET domain 355 634 IPR046341 -
Prci347g0004 657 SMART G9a_1 187 344 IPR003105 -
Prci347g0004 657 ProSiteProfiles SET domain profile. 479 626 IPR001214 GO:0005515
Prci347g0004 657 ProSiteProfiles Pre-SET domain profile. 415 476 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci347g0004 657 ProSiteProfiles Post-SET domain profile. 641 657 IPR003616 -
Prci347g0004 657 SUPERFAMILY PUA domain-like 174 362 IPR015947 -
Prci347g0004 657 MobiDBLite consensus disorder prediction 55 114 - -
Prci347g0004 657 Pfam SAD/SRA domain 191 344 IPR003105 -
Prci347g0004 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 90 651 - -
Prci347g0004 657 Pfam SET domain 490 626 IPR001214 GO:0005515
Prci347g0004 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 657 IPR025794 GO:0016571
Prci347g0004 657 Pfam Pre-SET motif 373 471 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci347g0004 657 Gene3D SET domain 362 656 IPR046341 -
Prci347g0004 657 SMART preset_2 369 463 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Prci347g0004 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 175 359 - -
Prci347g0004 657 Gene3D - 174 361 IPR036987 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci347g0004 1 657 Su(var)3-9 homologs AT1G73100 54.015 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci347g0004 SAD_SRA 1.1e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci347g0004 K24405 - gmx:100812173 882.478