Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci345g0001 ATGGCGCCCTTCCTAGTCTGTACCGTATATGTATGGTTCCCCTCAAGGAGACAAAAAGCCTTCACCGTTACCACCTCTGGTTTTGTTGCTTTTGGTTGCTATGCTTCTGGGCAAGGCCCTTTGAAGGTAAAGGAGGTACCAATACCAGTAGGGGTAGTTCTTGATCTAAAACTCGTCAGTAGGAATTTTGGCTATGGCGCTGCATGCGAATGGCACATCATGACTTTTATAAACGTTGTCCTCATTATCAAACAAGGCTTGATCTTCGAACTAGGGATTCTGAGAATGATGTCGTTAGAGCAGCATCCGCAGAACTTGGGAGCAAACTTCACGTGCCCATCATCTCGTTCTCAGCCACAAGCCCGTCCCTTCTCCAACACGAAGCAATTTTTCATAAGGACAGCACAAGATGATTACCCACAAGTGAAGGCGATAGCTGCCATTGTTGAAGCTTACGGATGGCGTGAAATTATCCTAATCTATGAAGACAACGAATACGGCAACGGTATGATTCCACATCTCACAGACCGCTTGGAAAAAGTTAACTCGCGAGTGCCTTACAGAACGCATCATCAATCAAATTCTAAGGAATCTGAAATTTTAGAAGAGCTGAAAACGCTAAATCAAAGTCGACCAAGAATATTTCTAGTTCACATGACTAGTGATCTTGGGTCTAAATTTTTCTTAGTTGTGAACAAGGCTAGGATGATGACCGAAGGCTATGGGTGGATAGTCACTGAAGGGCTATCTAATAAGTTAGACCCTTTGAGTTTAGAAGTGATGGATTCTATGCAAGGTGTTCTCGGGGGTTTCTATGAAGCACGAAGAGAGACCAAACATGCGGATCTTCTTAAGGCCTTAGAGTCCAAGTCTTTGGCTAGCCACAGGGAATCCTTTGTCAAAAGGCTTCTAAGAGATCAGTTGGGATTTAAGGATGAAAAGTTGAAGGCTTACGATATGCCTGAAGAATATGATCAAGCTCTCTCTAGTGGTGAGGTCGCTGCTATCTTTAATGAAATCCCTTATCTAAAGCTCTTCCTCTCCAAATATGGTTCTAAGTATGCTATGGTTGGACTGACCTATAAAACTGATGGATTAGGCTTTGCATTCCCACTAAAATCTCCTCTAGTGTCCTACTTTTTGAGGGAAATCCTTAATGTGATTGAAGATAAAGAAAAGTTTCAAAAGATTATGAACAGGTACTTTTCAGGAGGAATCGTATCTGAAGATGAAAGGGAGTCAATTCCAAATAGTCCAAGTCTTACTATGTCTAGCTTTGGAGGACTTTTCATCATCACCGGGTTAAAGGCTCAAATAGTGAATTGCTTTGATCGAAATAATGACTACTCTCTAAATAGAAGTGATTCAAGAATATTCCCCGCAAGTAATTCTGTAGATGGAGATGGAGAAAGCATCCTTGCCACTGATAATGTTGCTCCGAATGAAGAGGACCATATGGTTTCTTCAGAGCATAGTGATGATTTTACCCATAGGCATTAA 1500 0.4173 MAPFLVCTVYVWFPSRRQKAFTVTTSGFVAFGCYASGQGPLKVKEVPIPVGVVLDLKLVSRNFGYGAACEWHIMTFINVVLIIKQGLIFELGILRMMSLEQHPQNLGANFTCPSSRSQPQARPFSNTKQFFIRTAQDDYPQVKAIAAIVEAYGWREIILIYEDNEYGNGMIPHLTDRLEKVNSRVPYRTHHQSNSKESEILEELKTLNQSRPRIFLVHMTSDLGSKFFLVVNKARMMTEGYGWIVTEGLSNKLDPLSLEVMDSMQGVLGGFYEARRETKHADLLKALESKSLASHRESFVKRLLRDQLGFKDEKLKAYDMPEEYDQALSSGEVAAIFNEIPYLKLFLSKYGSKYAMVGLTYKTDGLGFAFPLKSPLVSYFLREILNVIEDKEKFQKIMNRYFSGGIVSEDERESIPNSPSLTMSSFGGLFIITGLKAQIVNCFDRNNDYSLNRSDSRIFPASNSVDGDGESILATDNVAPNEEDHMVSSEHSDDFTHRH 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci345g0001 499 FunFam Glutamate receptor 137 293 - -
Prci345g0001 499 MobiDBLite consensus disorder prediction 469 499 - -
Prci345g0001 499 SUPERFAMILY Periplasmic binding protein-like I 124 269 IPR028082 -
Prci345g0001 499 Gene3D - 300 405 - -
Prci345g0001 499 Pfam Receptor family ligand binding region 125 270 IPR001828 -
Prci345g0001 499 Pfam Bacterial extracellular solute-binding proteins, family 3 278 403 IPR001638 -
Prci345g0001 499 Gene3D - 139 299 - -
Prci345g0001 499 SUPERFAMILY Periplasmic binding protein-like II 284 404 - -
Prci345g0001 499 PANTHER OS06G0188250 PROTEIN 124 269 - -
Prci345g0001 499 MobiDBLite consensus disorder prediction 483 499 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci345g0001 273 432 Ion Channels AT5G11180 38.788 7.23e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci345g0001 K05387 - pcin:129296550 996.497