Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci342g0004 AAATTGGGTGATCCGACTGTGTCTGCACAAGATAATTCTAGCCCAATAAGTGTCGCGAATCACCCTATTCCTGAGTTGGATTCTCCATCCCACTTCTGTAGAGTTAGAATCAAAGCCACCAGCTTGAATTTTGCAAATTATTTGCAGATTCTGGGTAAGTATCAAGAGAAGGCTACTTTGCCATTTATCCCAGGTTCCGATTTTTCTGGCTTCGTTGATGCCGTTGGCCCCAAAGTTTCCAATCTCAGAGTCGGAGACCCTGTTTGTTCCTTCGTTCCCCTTGGGTCTTTTGCTGAATTGATCGTTGTAGACCAGAGCCAACTGTTCGCGTTTCCAAAGGTTTGTGATCTGGTTGCTGCCGGGGCTCTTCCAGTGGCTTTCGGTACTTCACACGTTGCACTCGTCCATAGAGCTGGATTGACCTCTCGTCAGGTATTGCTGGTTTTGGGTGCAGCAGGAGGTGTAGGCCTTGCAGCCGTACAAATTGGAAAAGCTTGTGGTGCCATTGTCATAGCTGTCGCTAGGGGAAGTGAAAAGGTGAAGCTTTTAAAATCACTTGGTGCTGATCATGTGGTGGACTTGGCTGGTCAAAATGTCACTCAGAGTGTCAAAGAGTTTCTCCATGCTCAAAAGCTCAAAGGGGTTGATGTCCTCTATGACCCAGTTGGAGGCAAGCTTAAAGAAACTATGAAGCTTTTAAACTGGGGAGCTAAAATTCTGATCATTGGGTTTGCAAGTGGAGAAATTCCTGTCATCCCTGCTAATATAGCTCTTGTCAAGAACTGGACAGTGCATGGTCTTTACTGGGGTAGCTATAAGATACATCGGCCAAGTGTTCTTGAAGATTCTGTCAGGGAGCTACTTTGCTGGCTGGCAAGAGGCTTGATTTCTATCCACATTTCTCATTCCTACCGGCTTGAAGAGGCCAACCTGGCTTTTGCTGCTATCAGAGATAGAAAAGCTATTGGGAAGGTGATGATTGTTTTTGATGAGAAACGTCCCATATCAAAGCTGTGA 1017 0.4582 KLGDPTVSAQDNSSPISVAKXHPIPELDSPSHFCRVRIKATSLNFANYLQILGKYQEKATLPFIPGSDFSGFVDAVGPKVSNLRVGDPVCSFVPLGSFAELIVVDQSQLFAFPKVCDLVAAGALPVAFGTSHVALVHRAGLTSRQVLLVLGAAGGVGLAAVQIGKACGAIVIAVARGSEKVKLLKSLGADHVVDLAGQNVTQSVKEFLHAQKLKGVDVLYDPVGGKLTXETMKLLNWGAKILIIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPSVLEDSVRELLCWLARGLISIHISHSYRLEEANLAFAAIRDRKAIGKVMIVFDEKRPISKL 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci342g0004 340 MobiDBLite consensus disorder prediction 1 21 - -
Prci342g0004 340 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 13 330 - -
Prci342g0004 340 SMART PKS_ER_names_mod 14 329 IPR020843 GO:0016491
Prci342g0004 340 MobiDBLite consensus disorder prediction 1 17 - -
Prci342g0004 340 CDD QOR1 1 329 - -
Prci342g0004 340 Pfam Zinc-binding dehydrogenase 155 285 IPR013149 -
Prci342g0004 340 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 117 280 IPR036291 -
Prci342g0004 340 Gene3D - 34 325 - -
Prci342g0004 340 SUPERFAMILY GroES-like 16 142 IPR011032 -
Prci342g0004 340 Gene3D - 127 274 - -
Prci342g0004 340 Pfam Alcohol dehydrogenase GroES-like domain 35 91 IPR013154 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci342g0004 59 260 Monolignol Biosynthesis Gene Families AT1G72680 25.941 5.20e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci342g0004 K00344 - gmx:100817700 539.265