Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci341g0006 ATGGCTGAGGTGCTGGTTGGAGCATTTCTCTCCGCCGCCATTGAGGCACTTCTTAAGAGATTGGCTTCTAGAGACATTCTTGACTTCTTGCGAGTCAAAAGGTTGCAGGATGGCTTCTTGCTGAACAAACTGGACTTGACCCTTAACAGTCTCAACAAAGTCATGGAAGATGCTGAGGAGAGGCAATACAGAGACCCTCGTGTGAAGCACTGGCTTGATGAGCTCAGAGATGCTGTGTTCCAGGCTGAGGATCTGCTGCTTGAGATTGCAACCGAGGCCTCTCGACGGAAGCTGCAACTTGAACTTCATCCCACCACAGGTAAACTACGCAACCACTTGACTTCCATTGTGAAATCTTTTGAAAAGAAAATCGAAACTAGGGTCCAGAAACTTGTAGGGTACCTAGATTTCTTAGAAAATCAGAGGACGCCGCTGAAGTTGAAGGATGGCTACTCTGGCTCACTCACTCAAGGGGGAGTGAATAGGGGAGTTTTCAAGAGATTGCCAGAATCGTCCTTGATAAATGAAGCTAATATATTTGGTAGAGGTCCTGATAAAGAGAAACTAATCAATATTTTAATGTCACCCAACGAGGGTGGGTGTGGATCCCCAGTGGACGTGATTGCCATCGCAAGTATGGGTGGGATGGGTAAGACAACTCTTGCCCGGCTTGTTTACGAAGACAAAAGGATAACAGAGGAATTTCAACACAAAGCTTGGGTATGCATTTCCGAAGAGTTTGATCCTGTGCAAGCTACAAAAGCGATTATTAAATCACTTGATGGTAAAATTAAACTTGAACAATCAGATGATTTAGATCCACATCAATGTCAACTAAAGGACAAGTTGAAGGATAAGAAATTTTTCTTGGTTCTTGATGATGTATGGAATCGGGATCATACTATCTGGGACTCCTTTCGAATTCCTTTCAACTGTGGAGCTCCAGGAAGTAAGATTCTCATTACAACACGTGAAAAACACATCGCAAAAGTTATCATGCGGTCCAGATATATTCATTGTTTGGAGCCATTACAAGATGAATATCCTTGGAAGTTATTTGCAAACCATGCATTTAGCGACCAATGTATTGATCCAGAACTTGAATCAATTGGTAGAAAAATTGTCCGCAAGTGTGGAGGATTGCCTTTGGCAATAAAAACATTGGGAAGTTTGCTGGGCACAAAACCAGCTCTTCAATATTGGGATGCAATTTTAAAGAGTGATATTTGGTCCTTACCAGAGGAAGAGAGCAATATAATCCCATCTTTAAGGTTGAGCTACCATTATTTACCTTCTAATCTCAAGCGTTGCTTTGCATTTTGTTCCATCTTTCCAAAAGATTACTTGATAGAGAAGGATGTTCTTATTCAGTTATGGATGGCTGAAGGTTTGTTACATTCTACTCACACAAGTAAGAACTTTGAAGAAGTGGGCAACGAAATCTTCAATGACCTACAATCCAGGTCATTTTTTGAACCATCAGAAAAGAATGGCAATTACTTCATAATGCACGATCTTTTGAACGATTTAGCAAAGTCTGTGATGGGAGAGTTTTGTGTTCAGCTAGAGGTTGGTCGGGTGCAAGAAATTTCAACAAAGGCTCGCTACTTTTCTTATAGATGCAAAGCAAATGAAAATCTTGAAACTTTTGAAGATTTCAAATGCCACCAATTACGTAGTTTCATCTTATTGCGTGAAAATTTCAACCTCAAGCATTACATCATTGATATTATGCTCCCGAAATTTATATTTTTCGGCCATGCTAAGCACAGGCACGCATTTGAGTTATTTTCAGGGAATCAAATTTTCAAAGACTTTGGTATCATGCATGGCACAAATGATGATATAATATCTAGATTTTCTCATCTCAAGCACATACGGGGGTTATGTTTGGTGGGATGTCTAAGTTTCAAAACGTTGGCAGATGATATTAGCAATTTAAAGCACTTGCATTACCTGGATCTTTCTGAGACTTTAATTGAAAAATTGCCAAATTCAATATGCTTGCTAATTAATTTACAAACATTGAGATTAAGGGACTGTCCTTGCTTGGTTGAGTTTCCATCAAATTTTCACAAGCTCATCAACTTGCGTCATCTGGACTTGGATGGTTGTTATTTCATAGAAAAGATGCCAAAACATATGGGAAAGTTAACTCGTCTCCGGACAATGAACCATTTTGTTGTGGCAAAGAAAGGAGGAACATGCTTGAAGGAACTAGGTTCCTTGAACCATTTAATGGGTTCACTAACCATCTCAAATATGGCATGCATAAAGAATTCCATGGATTTGAGAGATGCCGGTTTAAAAGAAAAGCATTTGGATAAATTATGTCTAAATTATAAGTGCTATTACCATAGCCGTGAAGCAGGACCACATCAAGAAGACATATTAGAAGGGCTTGAACCAAGTAATAATTTAAAAGAGATCATTGTTGAACATTACGGAGGTACCAAATTTCCAAACTGGCTGGGTGGTTCACACTTTTTACCTAATTTAGTGTCTTTATCTTTGACACGTTGTGCCAACTGTGTGAACTTACCGCCACTTGGGCAGCTACCTTCTCTGGAGAAACTTGAGATTACAGAATTGCATGGAATAAAGGTGATAGGGGAAGAGTTTTATGGGAATGGCTCCTCCAATGCTCCATTTCGTTGCCTTTCATATTTAAGTTTTAAAGAGATGAGAGAATGGGAAGAATGGAATATTTGTCGGGAAGATGAGAGTTTCCCAGCCCTTCAACAGCTTCATATACAGGAGTGTCCAAAACTGAGAAAGTCTCTCCCGCCACACCTTCCTTGTTTAAAACGGTTACACATTTACTCGTGTGGAAATTTGGAGACAACACTTCCCAAATCCTCTTGCATGGAAGTTATAACGTTAGCGGGGTGTAAGAAGATTATAGTAAAAGATGTGCTTGCATGGAGGGAATTAATACGGCCATCAGGACCCATGGCTCCATATGAGTTGAAAGAAATTTCATTTAGTGATCATGACTTTGAAGATGGAGAGTCCTTCCCTGACTTGCTGCCACGTACCGTCGAATCTCTTTCATTCTCAGGTTGTCGCAACTTGAGAAGCATAATATACAGGGGTCTTCTTCACGCCCCTCATCTTACTTCTTTATCTTTTGAAGACTGTCCAGACATGAGTTTTGAAGGCATGCCAGAGGATGGTTTCCCTCCATCCCTTTCTCATTTATCAATTCAAGATTGTCCGTTGCTGGAGGAGAGGTGTCAAAAAGAGACAGGACCAGATTGGCCTAAAATTGCTCGTATCCCTCATGTCTCCATACGCAGAGCTTGA 3306 0.4038 MAEVLVGAFLSAAIEALLKRLASRDILDFLRVKRLQDGFLLNKLDLTLNSLNKVMEDAEERQYRDPRVKHWLDELRDAVFQAEDLLLEIATEASRRKLQLELHPTTGKLRNHLTSIVKSFEKKIETRVQKLVGYLDFLENQRTPLKLKDGYSGSLTQGGVNRGVFKRLPESSLINEANIFGRGPDKEKLINILMSPNEGGCGSPVDVIAIASMGGMGKTTLARLVYEDKRITEEFQHKAWVCISEEFDPVQATKAIIKSLDGKIKLEQSDDLDPHQCQLKDKLKDKKFFLVLDDVWNRDHTIWDSFRIPFNCGAPGSKILITTREKHIAKVIMRSRYIHCLEPLQDEYPWKLFANHAFSDQCIDPELESIGRKIVRKCGGLPLAIKTLGSLLGTKPALQYWDAILKSDIWSLPEEESNIIPSLRLSYHYLPSNLKRCFAFCSIFPKDYLIEKDVLIQLWMAEGLLHSTHTSKNFEEVGNEIFNDLQSRSFFEPSEKNGNYFIMHDLLNDLAKSVMGEFCVQLEVGRVQEISTKARYFSYRCKANENLETFEDFKCHQLRSFILLRENFNLKHYIIDIMLPKFIFFGHAKHRHAFELFSGNQIFKDFGIMHGTNDDIISRFSHLKHIRGLCLVGCLSFKTLADDISNLKHLHYLDLSETLIEKLPNSICLLINLQTLRLRDCPCLVEFPSNFHKLINLRHLDLDGCYFIEKMPKHMGKLTRLRTMNHFVVAKKGGTCLKELGSLNHLMGSLTISNMACIKNSMDLRDAGLKEKHLDKLCLNYKCYYHSREAGPHQEDILEGLEPSNNLKEIIVEHYGGTKFPNWLGGSHFLPNLVSLSLTRCANCVNLPPLGQLPSLEKLEITELHGIKVIGEEFYGNGSSNAPFRCLSYLSFKEMREWEEWNICREDESFPALQQLHIQECPKLRKSLPPHLPCLKRLHIYSCGNLETTLPKSSCMEVITLAGCKKIIVKDVLAWRELIRPSGPMAPYELKEISFSDHDFEDGESFPDLLPRTVESLSFSGCRNLRSIIYRGLLHAPHLTSLSFEDCPDMSFEGMPEDGFPPSLSHLSIQDCPLLEERCQKETGPDWPKIARIPHVSIRRA 1101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci341g0006 1101 Pfam Rx N-terminal domain 9 105 IPR041118 -
Prci341g0006 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 441 IPR027417 -
Prci341g0006 1101 Gene3D Ribonuclease Inhibitor 893 1083 IPR032675 -
Prci341g0006 1101 ProSiteProfiles Leucine-rich repeat profile. 649 670 IPR001611 GO:0005515
Prci341g0006 1101 PRINTS Disease resistance protein signature 282 296 - -
Prci341g0006 1101 PRINTS Disease resistance protein signature 692 708 - -
Prci341g0006 1101 PRINTS Disease resistance protein signature 378 392 - -
Prci341g0006 1101 PRINTS Disease resistance protein signature 207 222 - -
Prci341g0006 1101 Coils Coil 41 61 - -
Prci341g0006 1101 Gene3D - 163 338 IPR027417 -
Prci341g0006 1101 Gene3D - 427 514 IPR036388 -
Prci341g0006 1101 Gene3D - 344 426 IPR042197 -
Prci341g0006 1101 Gene3D Ribonuclease Inhibitor 608 892 IPR032675 -
Prci341g0006 1101 Pfam NB-ARC domain 186 406 IPR002182 GO:0043531
Prci341g0006 1101 Gene3D - 12 130 - -
Prci341g0006 1101 PANTHER DISEASE RESISTANCE PROTEIN RP 54 946 IPR044974 GO:0006952
Prci341g0006 1101 FunFam Probable disease resistance protein At1g63360 427 513 - -
Prci341g0006 1101 SUPERFAMILY L domain-like 503 1079 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci341g0006 179 725 WRKY Transcription Factor Family AT5G45050 24.687 6.09e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci341g0006 - - pcin:129296520 2238.38