Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci339g0004 ATGCAAAATTCAAATCTCACTTTCCTCTTGAATTCTTTGTCGTCTAAATCATCCCTTCACAGCTTTTACAAAGGTTTTTCACGTAATCTTTATGGTCTCTACCTCTGCAGGGGTGATGTTTCCCTTCAAACCAGCCAAAACTGCGTCAAAGTTGCAATTCGAGAAATCAAAATCTGGTATGATCAGTGCATGCTCAGATACTCTCAAAGGAAGTTCTTTGGAGTGGCTCAAATTTCGCCAGCAAAATTCATGTGGAATCAGAAAAATAGGACTTCAGTCAGTCAACCCGATGTTGAAGCGCTAGCTCTGATTTACCAACTCATAAAAGAAGCCACAAACACATCTATGCTGTTCAGAGCAAACGGTTCGGAGGTGGTGGCAAATAGTTCTGAGCATCGATATGGGCTTGTGCAGTGCACAAGAGACTTGGACAGTAGTTCATGCAGCTTCTGTTTGTCACAATTGATGGTAGAAGCACAGAAGTTTCCCCGGCAGAAGGCTCGTTGGCACATATTGGGTCCAAGTTGCAATATAAGACATGAAAATTATATCTTCTATCAGCAAATTGGCGGACCAGATATTGCCCCTGTATCACCAATTTACCCGCCAGATGATGCAGGTTCTGCTGAAGGATTCACATCCAAAGTTAGAGCCAGTGTAGTTATGCTTGTCCCGATTGCAATGGCTGCAGCTTTTTTGGGTTTTGCAACTTACGTATGTTTTCACTGGAAAGGAAAACTTAAAGGGGGAGAAACAATTGATGAAATTCTGACACAGAAGTTGGAGAATTCAAAGAAGCCCCACTTTAAAGAGAAAGGAACCGCGAAAGATGAGTACAACAATGGAGAAGTTCAAAACTATCGTTTGAAGACCATTAAGGTCGCAGCAGACTATTTCTCAGAAGAAGCCAAGCTAGGGAAAGGAGGATTTGGACTCGTTTTCAAGGGGAAGTTGAGTAATGGCAAGGAGATAGCAGTTAAGAGGCTTTCATTCAAATCAGGGCAAGGCCTTGAAGAGTTCAAGAATGAAGTGACATTGATAGCAAAACTCCAACACAAAAATCTTGTGAGCCTTTTGGGGTTCTGTCTGGAAGAAAATGAAAAGCTTCTGGTCTATGAATACATGCCAAACAATAGCCTTGATACCTTCTTGTTTGATCCAATAAAACGTCAACGACTAGATTGGTCTAAGAGGAGGAGTATTATAAAGGGAATTGCTAGAGGACTCCTGTATTTGCATGAGGACTCAAGGCTAAAAATTATCCATAGAGATCTAAAAGCAAGCAATGTGTTACTAGATGAAGAGATAAATCCAAAAATATCAAATTTTGGAACCGCTAGAATTTTTGTCAGCAATCAAATTCAAGCTAGTACTGAAAGAGTTATTGGTACATATGGATATATGACACCTGAATATGCTTTAGAGGGATTATTTTCCATCAAGTCAGATGTTTACAGCTTTGGTGTCATCATGCTAGAAATTATCAGTGGAAAAAGAAACACCGGCTTCTACCAACCAGAACGTGGTTTGAGTCTTCTCTCCCATGCATGGCGACTCTGGAATGAAGGCAAGGGACTTGAACTTGTGGAGCGTCACTTGGTCAACACTTGCCCGGATAAGGATGAAGCTTTGAGATGGATCCGCATCGGGCTTCTGTGCGTTCAAAATATTTTTATTTGA 1680 0.4107 MQNSNLTFLLNSLSSKSSLHSFYKGFSRNLYGLYLCRGDVSLQTSQNCVKVAIREIKIWYDQCMLRYSQRKFFGVAQISPAKFMWNQKNRTSVSQPDVEALALIYQLIKEATNTSMLFRANGSEVVANSSEHRYGLVQCTRDLDSSSCSFCLSQLMVEAQKFPRQKARWHILGPSCNIRHENYIFYQQIGGPDIAPVSPIYPPDDAGSAEGFTSKVRASVVMLVPIAMAAAFLGFATYVCFHWKGKLKGGETIDEILTQKLENSKKPHFKEKGTAKDEYNNGEVQNYRLKTIKVAADYFSEEAKLGKGGFGLVFKGKLSNGKEIAVKRLSFKSGQGLEEFKNEVTLIAKLQHKNLVSLLGFCLEENEKLLVYEYMPNNSLDTFLFDPIKRQRLDWSKRRSIIKGIARGLLYLHEDSRLKIIHRDLKASNVLLDEEINPKISNFGTARIFVSNQIQASTERVIGTYGYMTPEYALEGLFSIKSDVYSFGVIMLEIISGKRNTGFYQPERGLSLLSHAWRLWNEGKGLELVERHLVNTCPDKDEALRWIRIGLLCVQNIFI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci339g0004 559 ProSiteProfiles Gnk2-homologous domain profile. 78 185 IPR002902 -
Prci339g0004 559 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 555 - -
Prci339g0004 559 FunFam Cysteine-rich receptor-like protein kinase 10 260 374 - -
Prci339g0004 559 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Prci339g0004 559 SUPERFAMILY Protein kinase-like (PK-like) 283 537 IPR011009 -
Prci339g0004 559 Pfam Protein tyrosine and serine/threonine kinase 302 516 IPR001245 GO:0004672|GO:0006468
Prci339g0004 559 SMART serkin_6 299 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0004 559 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 375 558 - -
Prci339g0004 559 Gene3D Transferase(Phosphotransferase) domain 1 375 557 - -
Prci339g0004 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Prci339g0004 559 Gene3D - 79 185 IPR038408 -
Prci339g0004 559 Gene3D - 2 72 IPR038408 -
Prci339g0004 559 ProSiteProfiles Protein kinase domain profile. 299 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0004 559 Gene3D Phosphorylase Kinase; domain 1 272 374 - -
Prci339g0004 559 Pfam Salt stress response/antifungal 4 69 IPR002902 -
Prci339g0004 559 Pfam Salt stress response/antifungal 105 183 IPR002902 -
Prci339g0004 559 CDD STKc_IRAK 305 555 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci339g0004 4 555 Receptor kinase-like Gene Family AT4G05200 40.345 1.53e-140 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci339g0004 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci339g0004 - - pcin:129293336 773.852