Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci339g0003 ATGGCTATTGCTTCTTTCAGACACATTTCCATTCTCTGTCTCTTCCTCATTCTCGTTTCCAGATGCACCAGCCAATCAGATTACCCAGAAGATTACTGCTTCACTTCCTATGGAACCTACGCCCCAAACAGCACCTACCAGTTCAACCTCAATATCCTCCTATCAAAACTAACTTCAAACCCTAACGTCAACTATGGCTTCTACAATCTCTCTTACGGCCAATCCCCTGACACAGTCTACGGAATTGGACTCTGCCGAGGAGATGTTACTCCCAGCACTTGCCGTGCATGCCTCAGAAATTCCACAACCATCACACAATCGTGTGATAAATACACCACCGCAATTGCAATCCATGATGAATGCCTATTGTTCTACTCAGATTACGTGATATTCGGTGTCGTCCCCACTCTTGATTTCACTATCTACAATAGGAGCGTAACGGATAATATAACAGATTGGGAGCAGTACAAGCAAGTTCTGAATGGCTTACTTGGGAGTCTGACACGGCAAGCAGCGTCCGGTGACTCTCGCTGGAAATTCGCAGCCGGGAATACTGATGCAGGATCGAGCAGGAGAAAGATATACGGTGTTGCTCAGTGCATGCCTGATTTGAATGAACCGGAGTGTCGAAATTGCTTGGATGGGGCGATCTCAAGAATCCCAGAATGTTGTAAGGGTAGCACAGGAGGTCGAGTTGTTAAACCGAGCTGCAGCATCAGATTTGAGAGCCACAGGTTCTATGAAATCGCGGCTGATGTACCAATTTCGGTATCAGTATCGGCACCGGCACCGGCGCCGGCGCCGCTGCTTTCTGCTCCTTCCGTCAATATAACGACGTCACAGGGAAAACACAATAAATCACGACTTTTCATTGAGATAACTGCGCCTGTAGTTGGCTTTGTGGTACTGCTTAGCCTTATTGGGATTTATGTTGCACGAGGATGGAAGCTGAGAACAGCTTTTCACAGTAAGTGCACATATCGATCTAATGATGAACTTGAAGCTGACGCTGAAATTGAGCCTGTTGCATCAATGCAGTTCAGCTTTGACACCATCAAAGTCGCTACAAATTCCTTCTCTGATGCAAATAAGCTTGGTCAAGGTGGATTTGGACCTGTTTATAAGGGTAGGCTCTCCAGTGGACAAAATATTGCCGCCAAAAGGTTGTCTGGGGTTTCTGGGCAGGGAGATACTGAATTTAAGAATGAAGTGCTATTAATGGCTAAGCTTCAACACCGAAATTTAGTTCGCCTGCTTGGTTTTTGCTTGGAAGAAAAAGAGCGACTACTTATCTATGAACTTCTTCCTAATAGAAGCCTTGATCACTTCGTTTTCGATCCTTTTAAGTGTGTGTGTTTGGATTGGGAAGCACGTTTCAAAATTATAGAAGGCATTACCTGTGAACTTAATTATCTTCATGAAAAATCTCAACAACGGATTATTTATCGAAATCTTAAAACAAATAATATTCTATTAGATATAAACATGAATCCTAAAATATTAGATTTTGGAATGGTAAAATTATTTGCCATTGATGAGTCTCAAGCCAAGACAAATCGAATTGTGGGAACCTTAGGGTATATGGCACCAAAATATGCAAAGCATGGACGATTCTCTGTAAAATCTGATGTATTTAGTTTTGGTGTACTAATTCTAGAGATTGTAAGAGGACAAAAGAATGGTGGCATCCATGATGAGGAGAATATTGATCACCTTCCAAGCTTTGCATGGAAAAGCTGGAGGAAAGGGACATCATCTAATATTGTAGATTCCACGTTATCTGACGGTTCAAGAAGCGAAATAATGAGATGCATTCACATTGGCTTACTCTGTGTTCAAGAAAGGGCTGCTAATAGACCAACCATGGCTTCGGTTTTGCTTATGCTTGACAGCGACTCTTTCTCTCTTCCAGAACCCTTACAACCTGCATTTTTTATGAATAACAAAAGTTTATCACACATCAAATCTGAGGAGTACAATTCTGTGTCAGCAAGCTCAAGTGAACAAAATAGTAAAACTGCTGAAATATTATCAGTTGATGAGGCCTCAATAACTAAGCTATATCCTCGCTAA 2073 0.4216 MAIASFRHISILCLFLILVSRCTSQSDYPEDYCFTSYGTYAPNSTYQFNLNILLSKLTSNPNVNYGFYNLSYGQSPDTVYGIGLCRGDVTPSTCRACLRNSTTITQSCDKYTTAIAIHDECLLFYSDYVIFGVVPTLDFTIYNRSVTDNITDWEQYKQVLNGLLGSLTRQAASGDSRWKFAAGNTDAGSSRRKIYGVAQCMPDLNEPECRNCLDGAISRIPECCKGSTGGRVVKPSCSIRFESHRFYEIAADVPISVSVSAPAPAPAPLLSAPSVNITTSQGKHNKSRLFIEITAPVVGFVVLLSLIGIYVARGWKLRTAFHSKCTYRSNDELEADAEIEPVASMQFSFDTIKVATNSFSDANKLGQGGFGPVYKGRLSSGQNIAAKRLSGVSGQGDTEFKNEVLLMAKLQHRNLVRLLGFCLEEKERLLIYELLPNRSLDHFVFDPFKCVCLDWEARFKIIEGITCELNYLHEKSQQRIIYRNLKTNNILLDINMNPKILDFGMVKLFAIDESQAKTNRIVGTLGYMAPKYAKHGRFSVKSDVFSFGVLILEIVRGQKNGGIHDEENIDHLPSFAWKSWRKGTSSNIVDSTLSDGSRSEIMRCIHIGLLCVQERAANRPTMASVLLMLDSDSFSLPEPLQPAFFMNNKSLSHIKSEEYNSVSASSSEQNSKTAEILSVDEASITKLYPR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci339g0003 690 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 130 - -
Prci339g0003 690 FunFam cysteine-rich receptor-like protein kinase 10 435 636 - -
Prci339g0003 690 Gene3D Phosphorylase Kinase; domain 1 320 434 - -
Prci339g0003 690 ProSiteProfiles Gnk2-homologous domain profile. 138 246 IPR002902 -
Prci339g0003 690 ProSiteProfiles Protein kinase domain profile. 359 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0003 690 FunFam Cysteine-rich receptor-like protein kinase 10 322 434 - -
Prci339g0003 690 CDD STKc_IRAK 365 630 - -
Prci339g0003 690 Pfam Protein kinase domain 360 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0003 690 Gene3D - 29 129 IPR038408 -
Prci339g0003 690 Gene3D - 138 246 IPR038408 -
Prci339g0003 690 ProSiteProfiles Gnk2-homologous domain profile. 28 130 IPR002902 -
Prci339g0003 690 SUPERFAMILY Protein kinase-like (PK-like) 342 629 IPR011009 -
Prci339g0003 690 Gene3D Transferase(Phosphotransferase) domain 1 435 635 - -
Prci339g0003 690 FunFam Cysteine-rich receptor-like protein kinase 10 140 246 - -
Prci339g0003 690 Pfam Salt stress response/antifungal 149 243 IPR002902 -
Prci339g0003 690 Pfam Salt stress response/antifungal 33 128 IPR002902 -
Prci339g0003 690 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 688 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci339g0003 27 690 Receptor kinase-like Gene Family AT4G21410 44.214 5.74e-180 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci339g0003 Pkinase 4.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci339g0003 - - pcin:129293328 1140.18