Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci339g0002 ATGCGATTGGGCTGTGCAGAGGTGGGGTTACGCAAGACGAATGCCGTAGTTGCCTCAGGAATGCCTCAATTCTTCTCCCAAAGTTGTGTCCAAATCCGAAGGAAGCTACGATACTCAAATTGTTCAATATCAGAGGCGTTGGAATCTGATTCTCTGCTCCATTTGGTATCGCATTACCTCTTCTATGATCCTGTAACTGATGGTTCGCCAAAACCTTCTTCTCCGTCGTCAACCTCACAAGGAAAGAACAAGACATTAATAACAGTTGTCGCTATAGTTGTGCCTTTTCTTGCCTCTATCGTGCTGCTTTATATCGTTTGGGTCTTTGTAAGAGAAAGAATGAACCGAAGAAGACATACTCAAAGCGAATCTGAAGTTAACAATGCCATTGAACTTGCTGAGTCAATACAATGTGCATTTGAGACCATCGAAGCTGCTACTGATAACTTCTCGGATGAAAACAAGCTTGGACAAGGTGGATTTGGACATGTTTACAAGGGTAGGCTCTCCAATGGACAAGACATTGCAGTAAAAAGATTGTCTACGAATTCTGGGCAAGGACATATTGAGTTCAAGAATGAAGTGTTATTAATGGCCCAACTTCAGCATGGAAATTTAGTAAGACTCGTTGGTTTTTGCTTAACACAAAATGAACGGCTATTAATTTATGAGTTTCTTCCTAATAGAAGTCTTGACTACTTCATATTTGATCCTTCTAAACGTTCACAATTAGATTGGGAAACTCGCTTCAAAATAATAGAAGGCATTGCTCGAGGTCTTCTTTACCTTCATGAAGAATCTCAACAACGGATTATTCATCGTGATCTCAAGCCAAGTAACATTCTCTTAGATCTAGAGATGAATCCTAAAATATCTGATTTTGGCATGGCACGACTATTTGCTTCAGATCACACTCAAGTCAATACAAATAGAATAGTAGGAACACGTGGATACATGGCACCAGAATATGCAAGATACGGACAATTCTCAGTAAAATCAGATGTCTTTAGTTATGGTGTATTGATTCTAGAGATAATAAGTGGCCAAAAGAATTGTAGCTTTCGCTGCAAAGAAAATGTGGAGCATCTACTAAGTTTTGCATGGAAAAGCTGGATGAGAGACACTGCCTTTGATATTGTAGACTCCACATTAAAAGATGGTTCAAGAAACGAAATAATGAGATGCATTCACATTGGCTTACTTTGTGTCCAAGAAAAGGCTTCTTGTAGACCAACCATGGCTTCCATTGTTCTTATGCTTAACAGCAACTCTTTTTGTCTTCCATTTCCCATGCAACCTGCATTTTTTATTAATCACAGAAGCTTCCCATCAGATGTCCAACATGTGGAGTATGGTTTTCGTTCAACAAGCTCAGAAAAGCAAGGAAGCAAATATGATGAGACACTATCAGCAAATGAGGTCTCCATAACTGATCTATACCCTCGATGA 1449 0.3941 MRLGCAEVGLRKTNAVVASGMPQFFSQSCVQIRRKLRYSNCSISEALESDSLLHLVSHYLFYDPVTDGSPKPSSPSSTSQGKNKTLITVVAIVVPFLASIVLLYIVWVFVRERMNRRRHTQSESEVNNAIELAESIQCAFETIEAATDNFSDENKLGQGGFGHVYKGRLSNGQDIAVKRLSTNSGQGHIEFKNEVLLMAQLQHGNLVRLVGFCLTQNERLLIYEFLPNRSLDYFIFDPSKRSQLDWETRFKIIEGIARGLLYLHEESQQRIIHRDLKPSNILLDLEMNPKISDFGMARLFASDHTQVNTNRIVGTRGYMAPEYARYGQFSVKSDVFSYGVLILEIISGQKNCSFRCKENVEHLLSFAWKSWMRDTAFDIVDSTLKDGSRNEIMRCIHIGLLCVQEKASCRPTMASIVLMLNSNSFCLPFPMQPAFFINHRSFPSDVQHVEYGFRSTSSEKQGSKYDETLSANEVSITDLYPR 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci339g0002 482 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 63 481 - -
Prci339g0002 482 Pfam Protein kinase domain 151 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0002 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Prci339g0002 482 SUPERFAMILY Protein kinase-like (PK-like) 140 448 IPR011009 -
Prci339g0002 482 Gene3D Transferase(Phosphotransferase) domain 1 226 425 - -
Prci339g0002 482 ProSitePatterns Protein kinases ATP-binding region signature. 156 178 IPR017441 GO:0005524
Prci339g0002 482 CDD STKc_IRAK 156 421 - -
Prci339g0002 482 SMART serkin_6 150 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0002 482 FunFam Cysteine-rich receptor-like protein kinase 28 226 428 - -
Prci339g0002 482 FunFam Cysteine-rich receptor-like protein kinase 10 113 225 - -
Prci339g0002 482 Gene3D Phosphorylase Kinase; domain 1 110 225 - -
Prci339g0002 482 ProSiteProfiles Protein kinase domain profile. 150 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci339g0002 482 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci339g0002 59 482 Receptor kinase-like Gene Family AT4G21410 51.562 2.42e-147 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci339g0002 Pkinase 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci339g0002 - - pcin:129293335 916.761