Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci330g0004 ATGGACACTCAAGCAGACCCTCCTGAAACGCCAGCCAAAAGGCACAAGTGCTCAGCATGCTATAGGCAATACAAGAAAAAGGAACATCTTATTGAGCACATGAAGATCTCATACCACTCAGTCCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTACTGGTCCATTGCCGAAAGGAAATTGTTCCAATTTTTTCTCTCAACATGGTTGTCAACTTTGCTTAAAATTATTTGATAGCCCCGCAGCTCTTATCGAGCATAAAGAAACATGTTATCTATCTGCACCAACTCCTCTGGGAACAGAGGCATTGGCCTATATAAGATCCCCAATACTTCGTCCAAATTCTCCTCATGAAAACCACACTGGAAGGCGCCCTGGAGCAATTGCCATTGATTGTGAAATGGTTGGTGGTGGAAGTGATGGATCATTAGACCTTTGTGCTAGAGTATGCATGGTTGATGAAGATGAGAATTTAATTTTCCACACCTATGTACAGCCTCAAATCCCGGTTACTAACTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGCCACTTAAGGAAGTTCAAGACAAGGTATTGCAAATTCTGTACAATGGAGAATCAATTGGCAAAGTTAGATTGGATGGAGGAAAGGCCAAGCTTCGTGGGCATGACCTAGAACATGATTTTGACTGCCTAAAATTGAATTATCCTGATCATATGTTGAGGGACACTGCAAAGTATCGTCCGTTGATGAAAACAAACTTGGTCAGCCATTCGCTCAAGTACCTTACTCGAACGTATTTAGGTTATGACATCCAGACAGGCACACATGACCCCTATGAAGACTGTGTTTCCGTGATGAGGCTGTACAAGAGAATCCGAAGCCAAGTTCATACCGAGGAAAACCTTGGAACATTTACTTCAAGTAACGTCACTGGCAATTCTGATTATTGGAAATCCAAGGAACTTGAGAACTCTACAGCAGATGAGCTCTTTGCCATGTCCAAATCAGACTATAGGTGTTGGTGCTTGGATTCGATGTAG 1077 0.4243 MDTQADPPETPAKRHKCSACYRQYKKKEHLIEHMKISYHSVHQPKCGVCQKHCKSFESLREHLTGPLPKGNCSNFFSQHGCQLCLKLFDSPAALIEHKETCYLSAPTPLGTEALAYIRSPILRPNSPHENHTGRRPGAIAIDCEMVGGGSDGSLDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMPLKEVQDKVLQILYNGESIGKVRLDGGKAKLLXGHDLEHDFDCLKLNYPDHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQTGTHDPYEDCVSVMRLYKRIRSQVHTEENLGTFTSSNVTGNSDYWKSKELENSTADELFAMSKSDYRCWCLDSM 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci330g0004 359 Gene3D - 135 320 IPR036397 GO:0003676
Prci330g0004 359 Pfam Exonuclease 139 302 IPR013520 -
Prci330g0004 359 SMART exoiiiendus 137 311 IPR013520 -
Prci330g0004 359 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Prci330g0004 359 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 18 309 IPR047021 GO:0004527
Prci330g0004 359 SUPERFAMILY Ribonuclease H-like 139 306 IPR012337 -
Prci330g0004 359 Gene3D Classic Zinc Finger 2 65 - -
Prci330g0004 359 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Prci330g0004 359 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci330g0004 1 359 C2H2 Transcription Factor Family AT3G27970 53.203 2.32e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci330g0004 K18327 - gmx:100788682 597.045