Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci328g0005 ATGTACGGAGAGGCTACCTATGAGTCGGATTCAGCCTGGTTGGAGTCAATTCGACTCCACTTGCTCGGTGACTTCGAGACTGCTTTTCCTGCTGATTCGGATACTTCTTCGGGTTCCGATCCGGTTTATACTCGGAGCTCCAGTTTCAGCAGCTTGTACCCGTGCTTGACGGACAACTGGGGCGAATTGCCGCTCAAGGAAGACGATTCTGAAGACATGGTGCTCTACGGCGTCCTCCGCGATGCAGTTCACGTCGGGTGGGTTCCCTCCCTCGATGTCGGGTCGCCCGAAAGCATTTCTTCTGGTTTCACCGCGTCTGTTACAGTGAAATCGGAACCCGATGTCTTGCCGGTGTTGGATTCCCCCGCGGGCCCTCCAGTGGTAAAGCAAGAGGAGGTGGCCGAAGCAGTCGCACCGGCCGCAGTTCCGTCGAAGGGAAAGCATTACAGAGGAGTAAGACAACGGCCGTGGGGGAAATTCGCGGCGGAGATCCGTGATCCGGCGAAGAACGGTGCTAGGGTTTGGCTTGGAACATTCGAGACGGCCGAAGACGCGGCTCTCGCCTACGATCGAGCCGCGTACAGGATGCGAGGCTCCCGGGCTCTGCTGAATTTCCCACTGAGAGTGAACTCGGGTGAACCTGACCCAGTGAGAGTGACGTCGAAGAGGTCATCGCCGGACAGATCGTGGTCGACATCGTCATCGTCGTCGGAGAGCGGCGCATCGCCGAAGAGAAGGAAGAAGGTGGTGGTGGTGGGGACAGGCCCAAAGGCTACCGGGCAAGTGGGAAGCCAAGTGGGTCTTGGAACGACGTCGTGCGTACGTGGAGGAGCGTTACTAGTTACTAATGCGTAA 855 0.5789 MYGEATYESDSAWLESIRLHLLGDFETAFPADSDTSSGSDPVYTRSSSFSSLYPCLTDNWGELPLKEDDSEDMVLYGVLRDAVHVGWVPSLDVGSPESISSGFTASVTVKSEPDVLPVLDSPAGPPVVKQEEVAEAVAPAAVPSKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSPDRSWSTSSSSSESGASPKRRKKVVVVGTGPKATGQVGSQVGLGTTSCVRGGALLVTNA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci328g0005 284 SUPERFAMILY DNA-binding domain 148 208 IPR016177 GO:0003677
Prci328g0005 284 Gene3D AP2/ERF domain 147 209 IPR036955 GO:0003700|GO:0006355
Prci328g0005 284 MobiDBLite consensus disorder prediction 223 240 - -
Prci328g0005 284 MobiDBLite consensus disorder prediction 210 249 - -
Prci328g0005 284 PANTHER DNA-BINDING DOMAIN 131 238 IPR044808 GO:0003700|GO:0009873
Prci328g0005 284 CDD AP2 147 206 IPR001471 GO:0003700|GO:0006355
Prci328g0005 284 ProSiteProfiles AP2/ERF domain profile. 148 206 IPR001471 GO:0003700|GO:0006355
Prci328g0005 284 FunFam Ethylene-responsive transcription factor 2 147 207 - -
Prci328g0005 284 PRINTS Ethylene responsive element binding protein signature 149 160 IPR001471 GO:0003700|GO:0006355
Prci328g0005 284 PRINTS Ethylene responsive element binding protein signature 172 188 IPR001471 GO:0003700|GO:0006355
Prci328g0005 284 SMART rav1_2 148 212 IPR001471 GO:0003700|GO:0006355
Prci328g0005 284 Pfam AP2 domain 148 198 IPR001471 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci328g0005 1 281 AP2-EREBP Transcription Factor Family AT4G17500 51.475 3.08e-84 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci328g0005 AP2 1.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci328g0005 K09286 - csav:115695812 304.679