Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci327g0008 ATGTCCTCCGCCACCGTCACCGCTGCCGACACCACCGTCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACGTACTGGTGTCACGAATGCGACATGAGCGTTGCTCTGTCCTCCCCTTCTTCGTCTTCAACCTCCTCCTCCTCGTCGACTCTTCTCTGTCCCCACTGCCACACCCATTTCCTTGAACTCATGGACTCCCCTTTCTTCCCTCAATCTGACTCTCACTCATTCCCCTCTTCGCTTTCCCTCTTCGACTCCCCCTACATCCACCACCTAATCCAGAACCACCTCCTTACCTCGGACGACGACGACGACGACGGTGAACTTGAGTTCGACGACACTTTTGAAGACCCGTTATCTCTGCTCTCCACACTGCCAAATAGTACCTCCAAATCTTGCTCTGATTCTGTGCCCACTATAGTAGTTACCTCTTCCTTGCTATCGCAGCTTGACCCTGGAGGGGTTCTCTGTGCGGTTTGCAAGGACACAATTGGGGTTGATGCGGAGGCTAAGCAGCTTCCGTGTAAGCATTTATACCACTCCGATTGTATCACGCCTTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAACAAGAGGAGGATGGGGTTTCTCAGGCAAGGAGGATCAGAAGGCAGTTGAGAACGGCCATGATGAGGTTGTCTGAATTGATGGAGGAGGAGGATGATTTCTATGGGTTGAGGACTACTCTGAGTCACATTGCTAGTAGACACCGCGTTCTTTCTTCTGCTGTTTCGGATCATAGGGATGATGAGAACCCTTCTGATTCCCTGGCCTCCCCTCGGGTGACGGAACCAGATTCTGTGTCTGCTGGTGGCAGTGAAAATTCGGAGGCTCTTTCGAGCTGA 888 0.5293 MSSATVTAADTTVVPETAEAEMKTYWCHECDMSVALSSPSSSSTSSSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPSSLSLFDSPYIHHLIQNHLLTSDDDDDDGELEFDDTFEDPLSLLSTLPNSTSKSCSDSVPTIVVTSSLLSQLDPGGVLCAVCKDTIGVDAEAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEQEEDGVSQARRIRRQLRTAMMRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAVSDHRDDENPSDSLASPRVTEPDSVSAGGSENSEALSS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci327g0008 295 SMART ring_2 157 197 IPR001841 -
Prci327g0008 295 MobiDBLite consensus disorder prediction 270 295 - -
Prci327g0008 295 Pfam Ring finger domain 157 198 IPR001841 -
Prci327g0008 295 Pfam zinc-ribbon 24 64 IPR039525 GO:0061630
Prci327g0008 295 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 214 IPR013083 -
Prci327g0008 295 ProSiteProfiles Zinc finger RING-type profile. 157 198 IPR001841 -
Prci327g0008 295 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 82 201 - -
Prci327g0008 295 MobiDBLite consensus disorder prediction 256 295 - -
Prci327g0008 295 SUPERFAMILY RING/U-box 149 201 - -
Prci327g0008 295 Coils Coil 213 233 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci327g0008 18 260 C3H Transcription Factor Family AT3G60080 35.252 3.51e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci327g0008 K11982 - pcin:129316714 376.711