Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci327g0002 ATGGAGCTTGATTTGAACGAGGAGCCCTTGGACCAAACCCCTACTTCAGTGATTGGATTTGATTCTATATTGGATGAGCTAGAATCTACCCATGACCATATAGAGGAGCGCATTAGGCAACTTGAAGCAGTAACGTTGAGAGCTAGGCAGCGTCAGAGGTGGCGACGGGGTCATGATTCAGTTCAAATAAATAACATTGTCGCAGATATGATGATGGTGCCTAGTGCTCAGGATGAACACAGGATGCCCCAAGAATATGGTGGGATTGCGGTCCAAGAGCAAACAGTTGTGTTAGCAGAGTTGACCAGAACTAATGCTCAAAATGAAGGTAGATTGGCTAGTGAAGAGGCTGGTGCAGTCCAAGAAAGAACGGTCAACAATAGGAAAACAGGCAAGAGGAACAGTTCCCATTTAGTAGCTCAAGCATTGGGCATGGATCCATATATAGATGAGACAGTGAGCACCACTGGGAATTTTTTTGATTGTAATATCTGTCTGGACATGGCAAGGGATCCTATTTTGACCTGCTGCGGTCATTTATTCTGCTGGCCATGCTTCTATCAGGTGTCGTTTGACTATTCAAATGTAAGGGAATGCCCTGTTTGTAAGGGAGAAGTCGCTGAAACAGGCATTATTCCAATATATGGAAGTAAAAACAACTCTAGCAACCATGAGTTGGAATTGAAAGAAAGTGGCTTCACTGTCCCTCCTCGGCCCCAGGCACGTAGGATTGAGAGTCTCAGACAGCAGCTTATAAGCAGGGGAGCATCTTCTTCTACAATCCAGGAGCTTAGGCGGTTTATTGGTGCAGCTGCAACTGATAGAACTCGTTTTTCAGTCAATCAACCTCACCATTCCCAGCCTCAAGCATTGCATGGCATGGAGACCAGAGTCAGGCAGCCTAATCGTTCACGTCTCCTTTCAAGGTTGTTAGTGGAAGGAGCTGCTTCATTTTCATCCCTTTCATCAGCATTAAATTCTGCAATGGATTCTGCTGAAAGATTAGTTGGAGACCTTGAAGCATATATTCATCCGCAGCAACCTCAACCCATAGGAAGCTCTAGAGAGCTGCTTCATCCTCTTCCTCATAATAGAGATTCACCTTCTAGCATTGCTGCTACAAACCAATCTGGGAGACTTATTCCAGATGTTGCTGCAAGCAATTCCGCTGCAAATGCTTCTCTTTCTCCTTTACATATGAATAATGATGCAACTGCTGTAATAGATTCAGGTATACAGACAACAGATAGCAGTGTACAGATTAGTTCAACAGAGCCTTCCTCATCTTCTAGCAGAACTGTTGTGACAGGACTTCCAGACCTTTACAATAGGGTTTCAAATGGGCGCAGAAGGAGAAGGTTAAGAAGATGA 1371 0.4449 MELDLNEEPLDQTPTSVIGFDSILDELESTHDHIEERIRQLEAVTLRARQRQRWRRGHDSVQINNIVADMMMVPSAQDEHRMPQEYGGIAVQEQTVVLAELTRTNAQNEGRLASEEAGAVQERTVNNRKTGKRNSSHLVAQALGMDPYIDETVSTTGNFFDCNICLDMARDPILTCCGHLFCWPCFYQVSFDYSNVRECPVCKGEVAETGIIPIYGSKNNSSNHELELKESGFTVPPRPQARRIESLRQQLISRGASSSTIQELRRFIGAAATDRTRFSVNQPHHSQPQALHGMETRVRQPNRSRLLSRLLVEGAASFSSLSSALNSAMDSAERLVGDLEAYIHPQQPQPIGSSRELLHPLPHNRDSPSSIAATNQSGRLIPDVAASNSAANASLSPLHMNNDATAVIDSGIQTTDSSVQISSTEPSSSSSRTVVTGLPDLYNRVSNGRRRRRLRR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci327g0002 456 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 121 300 IPR045103 GO:0005783|GO:0006511|GO:0061630
Prci327g0002 456 Pfam zinc-RING finger domain 162 203 IPR001841 -
Prci327g0002 456 SUPERFAMILY RING/U-box 155 212 - -
Prci327g0002 456 SMART ring_2 162 202 IPR001841 -
Prci327g0002 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 265 IPR013083 -
Prci327g0002 456 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
Prci327g0002 456 MobiDBLite consensus disorder prediction 345 374 - -
Prci327g0002 456 Coils Coil 24 44 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci327g0002 113 268 C3H Transcription Factor Family AT3G58030 43.949 4.07e-36 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci327g0002 - - pcin:129296436 843.958