Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci31g0001 ATGGACAGACCTGCACAGTCCCAAACGAAACGCAAAAACGCTACCTTCTTCAAGGTTCTGATTCAAGATTTCTCTACCTTCTTGGGATGGAGTAAATTTGTGGAGGACAATAAATTGGAGAATGGAGATTTCTTAGTGTTCAAATATATGTCTGATTATTCAAAGTTCAAGGTCAAAATCTACGGCAAAACTTGCTGCGAGAAGGAATCTGCAAAAAGGATTGAGACAGACTCTGATGTTGGAGACGAAGCTTCTGATGAAGATGAACCCATTGATATTGAATCTGATTCTTCTCGTCCTGTCGTCGAAGAAGAAGATAATGATGAACAAGAAGTTGCAGGTAAATCGAAGCAGTCAATGAGTGAAGAGACGAGGAATGAAGAGGGCGAAACATTGGCTAATGATAATCAAATAGAATTTAAATCTGAGAATCCTTTCTTCCAAGTCAAACTCAAATCTTCAAGTATCAGCAGCTATCTGAATATACCATTGAGCTTTTCGAGAGAACACATAAGGAAGGAGAGCCAAAGGCAAGATATAAAGCTAGAGATGTCAAAGTGCAACAAAATGTGGGATGTGGGTCTGATGGTGTTGTGGGGCCCAGGCAACAAGAAGGTTATTGCAGGAGCAAGACTGAGTCAGGGATGGAAGGGCTTCGTCTCAGAATATCAGCTGCAAATGGGAGATCTCTGCATCTTTGAAATGATCCACCATACTCATCACCTTCTCTTCCGTCTTCATGTTCATCGATGGGATCAACAGAACCACAAGTTTGTTCACATATTTTAG 789 0.4094 MDRPAQSQTKRKNATFFKVLIQDFSTFLGWSKFVEDNKLENGDFLVFKYMSDYSKFKVKIYGKTCCEKESAKRIETDSDVGDEASDEDEPIDIESDSSRPVVEEEDNDEQEVAGKSKQSMSEETRNEEGETLANDNQIEFKSENPFFQVKLKSSSISSYLNIPLSFSREHIRKESQRQDIKLEMSKCNKMWDVGLMVLWGPGNKKVIAGARLSQGWKGFVSEYQLQMGDLCIFEMIHHTHHLLFRLHVHRWDQQNHKFVHIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci31g0001 262 ProSiteProfiles B3 DNA-binding domain profile. 1 64 IPR003340 GO:0003677
Prci31g0001 262 MobiDBLite consensus disorder prediction 110 134 - -
Prci31g0001 262 Gene3D - 124 253 IPR015300 -
Prci31g0001 262 Gene3D - 23 66 IPR015300 -
Prci31g0001 262 CDD B3_DNA 29 61 IPR003340 GO:0003677
Prci31g0001 262 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 27 251 IPR044837 -
Prci31g0001 262 CDD B3_DNA 145 247 IPR003340 GO:0003677
Prci31g0001 262 SUPERFAMILY DNA-binding pseudobarrel domain 28 69 IPR015300 -
Prci31g0001 262 SUPERFAMILY DNA-binding pseudobarrel domain 140 249 IPR015300 -
Prci31g0001 262 MobiDBLite consensus disorder prediction 72 135 - -
Prci31g0001 262 Pfam B3 DNA binding domain 146 245 IPR003340 GO:0003677
Prci31g0001 262 Pfam B3 DNA binding domain 29 61 IPR003340 GO:0003677
Prci31g0001 262 SMART B3_2 146 250 IPR003340 GO:0003677
Prci31g0001 262 ProSiteProfiles B3 DNA-binding domain profile. 145 252 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci31g0001 29 236 B3 DNA Binding Superfamily AT5G66980 26.939 1.91e-09 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci31g0001 B3 4.5e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci31g0001 - - pcin:129294980 518.85