Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci317g0003 ATGGAAGTTGTTGCCAATTTGTTAAGCATCATAGGCTCGTGTTGCTCATTGCATGAAGTAGTTAGACCAAAGTATAAACACTTTAGAACACCCAAAAGGAGCATTCGGCAGCTGAATAATTTGATGCAAAGGCTGGATGCTCATGAAAGGGATGTTGAACATGAAATAAACCAATTGCGGCATCTAAAAGGGGCAGAGTCAACAAATGTGTGTAATATATGGCGTAAGCAAGTTGATCAGGTAAGAAGTGAAGTGCGCAATCTCGTGGATGAAAATGGCCCGTATAGACAAACTAAATGGTTCTGTTTCATTTGTTCAAGAATCAAGTTGGGGGAACTTATTGAAGAGAAGATCCAAGAAATTGATAAACTTATAGAGACTGTTCCAGATTCAAAGGTTATAGCTATTCCTGTAAGCAGAAGGGGTGATATTTTGCCTACAACGCCAATGATGGAAAACCAAACACACAAACTTACTTTTATGAGGATTTGGGAGTTCTTGTTTGATAGGAATGCCGGAAGGATTGGTGTCTGGGGAATGGGAGGAGTGGGCAAGACAACTATTATGTCAGAAATTAACAATCACCTGTTGAATAATAGCAGTGAGTTTAACTGCATTATTTGGGCAAAGGCATCAAGTGATCTAGAGAAGTTGCAGCAGGATATAGCTGTGAAGTTGAATTTGACTTTCCAAGAAGCTGATGATGAAAGAACAAGAGCCTTCGAATTGTTTCATACTTTAAAAAGAAGGAATAAATTTACACTGATTTTAGATGATGTTTGGGAACCATTCAATATTGAAAGTGTTGGAATCCCTGTGCCAACAGTAGAGAATGGTTGTAAATTGGTGATTATAACTCGAGACGTTAGAGTGTGCAGAGGTATGGAAACAGACAAAGATGTGGAAGTGAAAGTTCTTTCAGAAGAAGAAGCATGGGATCTCTTCAAGGACAAAGCTGGGGAACAAGTGCTATCAAATCCAAAGATACAATCAATTGCAATGGATGTGGCAAAAGAATGTGGTGGTTTGCCTCTGGCTATTGTTGCAGTTGGACGTGCAATGAGAAACACAACTAATATAAGAGAGTGGGAGAATGCACGGGAGGAGTTAAGAACTTCAAGTACTGGCATATACACTATTGATGAAGTGGTGTGTTCTCGTTTGAAGTTGAGCTATTTAAAACTAAAGGATGATACAAGGCGGTCGTGCTTTCTATATTGTTCCTTATACCCAAGAGGTCACCTAATTGATGAGAATGAATTGATTAATTATTGGGTATGGGAAGATTTATTGGAAGGTCGAAGCACGTCTGTGATGAAACGAAAGGGGCAAATGATTATAGATGAACTAATAACAGGATGCTTGCTGGAATCGAAGATTGAAAATGGGGTGAGATTTGTTAAATTGCATGATATGGTAAGAGATATGGCCATCCCAATCATGAGTACAAAGCCTAGATGCATTGTGAATGCTGGCATCGGACAAGTAAAGCCACCAATACCTCCGGAGTGGAGAGAGGATGTTGAATGGGTATCGTTGATGAGAAATGATGTGAAATCTATAGACTTCAGTCCAACGTGTCCTAGACTCACTTCTTTGCTACTTCAATACAACTCATTTGAAGAAAACATATCGCACCACTTCTTTGACAACATGCATGGGCTAAAAGTTCTTAATCTCTCCTATACTGGGATTCATGTTTTGCCGGTGTCTCTTTCGAATTTGGAGAACCTACATGCCTTGTTGTTGAGCCACTGTTGGAATCTTGTTGAAGTTCCATCCTTAGAAAGGCTCACTAAATTGAAGTATTTAGATTTTTCATTTTCTAGAAAGTTAATAGAACTTCCACGGGGGATGGAACAATTGACTGATTTGAGACACTTGGATTTCTCCTTCACATCTGTCCAAAACTTACGAGCTGGACTCATATCCAAATTTACTCTTCTGGAGGGCTTGTTGATGTTGGGTACGCATATGATTGGAGCATCATCTGAGAGCGAAGTACGCCCTTTGTTTGCAGTGTCACTGGAAGAAATCATATCCTGTCGTAATCTGTCTCTTCTACACATGCAATTCCTTGACTTTGAAGATTATCGAAAATTTGCTAAATTTTTGAATTATTCTCAATTAAAGGAGTCGAAGCTTGTTGTCGGGTTTTCAGTTGTTCCAAAATTATCTGAGAAAAATTGTTTGGCAATAAGTAAGAGAGGCAAAGGAAGAGATGTTTCAGAAGCCCAGACTACTGCATTGATTCCACGAAATGTAGAGGAGTTAATAATTTCTAAGTTTGATGGTATGGAACGCGTTCTTGAATCCGAGGAGAATAATTTGCCCCAGCGACAGCCAATGAATCTACATCATATTCCAAGGTTGAGGAGCATGTTGAGATCAGGTACTTTGATGAACCTCAAGAGAATTGAGGTGTCAGTCTGTTGTTCGTTGAAATGTCTGTTCCCGAGGCAGCTCGTGGACGAGCTTGAAAGTCTGGAAGAAATTGCCATCAGATGGTGCCCCAAGATGGAAGAAATTATTGAAGGAGAGAGGAATGCAAGCGCTGAAAACAGCAGCCATGCTGCCAAAGTGATCCTTCCGAAATTGCAAAGGTTGAAATTGAAGGAGTTGCCAAGACTGAAAAGCATATACAAAGGGGACATTGAATGCAATTCTCTACGCACTATTGAAGTTGTGGGCTGCATTGCTCTGAAGAAGTTGCCTCTGGGTTTGTTTGGAGTAGAGGCTGGTCAGCAAATCTCACCATCAACCACTCTCCAAGAAATAATATGTGAAAACGAATGGTGGCAATCACTGCAGTGGGACCAACCTGAAGCTGAGAATCTCCTTCGACCACGCTTAGTCGGTTACTATGACAGTGGTCTGGCGTGGAGGCATGCATCCATGGACAGGTTTGCTCCGAGCAGCAGTAATACAGTGTGA 2934 0.4066 MEVVANLLSIIGSCCSLHEVVRPKYKHFRTPKRSIRQLNNLMQRLDAHERDVEHEINQLRHLKGAESTNVCNIWRKQVDQVRSEVRNLVDENGPYRQTKWFCFICSRIKLGELIEEKIQEIDKLIETVPDSKVIAIPVSRRGDILPTTPMMENQTHKLTFMRIWEFLFDRNAGRIGVWGMGGVGKTTIMSEINNHLLNNSSEFNCIIWAKASSDLEKLQQDIAVKLNLTFQEADDERTRAFELFHTLKRRNKFTLILDDVWEPFNIESVGIPVPTVENGCKLVIITRDVRVCRGMETDKDVEVKVLSEEEAWDLFKDKAGEQVLSNPKIQSIAMDVAKECGGLPLAIVAVGRAMRNTTNIREWENAREELRTSSTGIYTIDEVVCSRLKLSYLKLKDDTRRSCFLYCSLYPRGHLIDENELINYWVWEDLLEGRSTSVMKRKGQMIIDELITGCLLESKIENGVRFVKLHDMVRDMAIPIMSTKPRCIVNAGIGQVKPPIPPEWREDVEWVSLMRNDVKSIDFSPTCPRLTSLLLQYNSFEENISHHFFDNMHGLKVLNLSYTGIHVLPVSLSNLENLHALLLSHCWNLVEVPSLERLTKLKYLDFSFSRKLIELPRGMEQLTDLRHLDFSFTSVQNLRAGLISKFTLLEGLLMLGTHMIGASSESEVRPLFAVSLEEIISCRNLSLLHMQFLDFEDYRKFAKFLNYSQLKESKLVVGFSVVPKLSEKNCLAISKRGKGRDVSEAQTTALIPRNVEELIISKFDGMERVLESEENNLPQRQPMNLHHIPRLRSMLRSGTLMNLKRIEVSVCCSLKCLFPRQLVDELESLEEIAIRWCPKMEEIIEGERNASAENSSHAAKVILPKLQRLKLKELPRLKSIYKGDIECNSLRTIEVVGCIALKKLPLGLFGVEAGQQISPSTTLQEIICENEWWQSLQWDQPEAENLLRPRLVGYYDSGLAWRHASMDRFAPSSSNTV 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci317g0003 977 Gene3D - 305 391 IPR042197 -
Prci317g0003 977 Pfam Leucine rich repeat 528 586 IPR001611 GO:0005515
Prci317g0003 977 Pfam NB-ARC domain 161 391 IPR002182 GO:0043531
Prci317g0003 977 Coils Coil 71 91 - -
Prci317g0003 977 Coils Coil 35 65 - -
Prci317g0003 977 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 407 IPR027417 -
Prci317g0003 977 Gene3D - 392 478 IPR036388 -
Prci317g0003 977 Gene3D - 141 303 IPR027417 -
Prci317g0003 977 Gene3D Ribonuclease Inhibitor 486 945 IPR032675 -
Prci317g0003 977 PRINTS Disease resistance protein signature 596 612 - -
Prci317g0003 977 PRINTS Disease resistance protein signature 174 189 - -
Prci317g0003 977 PRINTS Disease resistance protein signature 247 261 - -
Prci317g0003 977 PRINTS Disease resistance protein signature 340 354 - -
Prci317g0003 977 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 29 905 - -
Prci317g0003 977 FunFam Probable disease resistance protein At1g63360 392 479 - -
Prci317g0003 977 FunFam Probable disease resistance protein At5g66910 305 391 - -
Prci317g0003 977 SUPERFAMILY L domain-like 466 933 - -
Prci317g0003 977 FunFam Probable disease resistance protein At1g61300 147 300 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci317g0003 175 582 WRKY Transcription Factor Family AT5G45050 25.761 4.00e-12 68.6