Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci317g0002 ATGAGTTTCTCTTTTACTATTCCTAGAACACTTTCAAGATTTTGGCTATTCTCTTTTCTGCTCATCTCGTGTGTTATCTTTCATGGCTACGGAGATGAGTCTACAAAAGGAGACACTGAAGTTATACGTATCGGTGCAATTATTGATGTTAACTCCAGAATTGGTAGAGAGCAGCAAATAGCCATGGAAATTGAAGCTCAAAACTACAACAACACATCAAAGACTCACAAACTGGCTCTCTATTTCCGGAACGCCACCAAGGAAGCCTTCAGAGTCACCTCTCTTGCTGAAGAGTTAATTGGAAAGCAGAAAGTAGAAGTAATTATAGGGATGCATACATGGCAAGAAGCAACTCTAGCGGCTGAAGTTGGAAGCCAAGCTCAAGTTCCAATCATATCCCTTGTCTCACCTGCAATTACCACACCATTGACACAGAAACGATGGCCTTATCTGGTAAGGCTAGCTAACAATGTGACTGCACAAGTAAAATGCATTGCAGACATAGTGAATGCTTTCAGTTGGCAAAGAGTAGTAGTCATTCATGAAGATGATGGCTATGGTGGTGGAGACTATGGGATGTTGTCACTCCTTTCTGAGGCCCTCCAAGACTTTGGTTCGGTAATTGAGTACCAGTTAGCTCTTCCACCAATATCAGTTTTATCAGATTCAGATTCAAGAGGGCTAATCAATCAAGAGCTGATTAAGTTGGTAAAGCAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTGGAAATGGTGACTCATTTGTTCAGAGAAGGTTCAAAGATGGGACTTGTGGATAGAGATTCAGCTTGGATAATCTCAGAGAGCATAACTAATTTGCTTGACTCTGTGGACAAGTCTGTTATTTCCTCCTATATGGGAGGGTCTTTAGGAATCAAGACACACTACTCAGAAAATAGCAGTGAGTATCAAGAATTTCGAGCTCAGTTCAGGAAAAAATTTCACGCAAGGAATCCTGAGGAAGATAACAGCAACCCAGGATTTAATGCTTTGCAAGCATATGATAGCATCAAAGTTGTCATTCAAGCAGTAGAAAGAAAGGCAAGGAACAATAGTAGCAGCACAAAGGCTTTGCTAAGAGAAATATGGTCTAGCAGTTTTGTAGGTTTAAGTGGGGAAATTCATTTTCAAGCAGGTCAGCTCTTGCAGAATCCTATCCTAAGGTTAGTAAATGTAGTTGGAAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACTACAGGCCTGCCTACAGGAAAAAGTGAAGAAAATGCTACTGCCAGCGCATTAAGTTTGGCTGGTGTAGTACAATGGCCAGGGAATTTGCATAGAGCTCCAAAAGGTTGGAATATGCCTATGAAGCAAAACCCAATGAGAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGACTATGGAAACAGTCCAGATCAGAATAAATACAGTGGATTCTGTATTGAGGTTTTCGACAAGGTGCTTGGGCTTTTGGAATATGATCTACCCTATGAGTTTCATCCCCTCAATGTAACTTATCCTGATCTGGTTCAACTTGTGTACAACAAGACTTATGATGCAGTGGTTGGTGACATGACCCTACTAGCAGAGAGACTGCAATACGTGGATTTTACTCTGCCTTATGCAGAATCAGGATTGTCCATGATAGTTCCAATGAAGTCTCAAGAGTCAGCATGGATGTTTCTAAAGCCGTTCACCTGGCAAATGTGGGCGGTTACGGGTGCAATCTTGATTTACACAATGTTAGTAGTTTGGTACCTCGAACGAGTACCTAACCCAGAGTTTCGTGGCAATTGGAAGAGACAGTTTAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCAGAGGGAGCAAATGCATGGCAACTTATCTCGTGTGGTGATGGGAGCATGGCTTCTTCTAGTCATGGTTCTGACCTCAAGCTACACAGCTAGTCTTTCTTCAATATTAACAGTTCAACAGCTGCAGCCAAATGTCACAGACATTGAGTGGCTGAAGATGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTTAGATCATACCTAGAGAAAGTTGAACAGTTCAAGCCAGAAAACATCATCAACATAAGTAATGTTCCAAAAAGGCTCCCCAGTGGCCAAAGATGTTTCTAA 2196 0.4121 MSFSFTIPRTLSRFWLFSFLLISCVIFHGYGDESTKGDTEVIRIGAIIDVNSRIGREQQIAMEIEAQNYNNTSKTHKLALYFRNATKEAFRVTSLAEELIGKQKVEVIIGMHTWQEATLAAEVGSQAQVPIISLVSPAITTPLTQKRWPYLVRLANNVTAQVKCIADIVNAFSWQRVVVIHEDDGYGGGDYGMLSLLSEALQDFGSVIEYQLALPPISVLSDSDSRGLINQELIKLVKQTQSRVFIVLHSSLEMVTHLFREGSKMGLVDRDSAWIISESITNLLDSVDKSVISSYMGGSLGIKTHYSENSSEYQEFRAQFRKKFHARNPEEDNSNPGFNALQAYDSIKVVIQAVERKARNNSSSTKALLREIWSSSFVGLSGEIHFQAGQLLQNPILRLVNVVGKSYKEIDFWTQENGFTTGLPTGKSEENATASALSLAGVVQWPGNLHRAPKGWNMPMKQNPMRIAVPGRTSFSKFVKVDYGNSPDQNKYSGFCIEVFDKVLGLLEYDLPYEFHPLNVTYPDLVQLVYNKTYDAVVGDMTLLAERLQYVDFTLPYAESGLSMIVPMKSQESAWMFLKPFTWQMWAVTGAILIYTMLVVWYLERVPNPEFRGNWKRQFSTALWFTFSSLFFAQREQMHGNLSRVVMGAWLLLVMVLTSSYTASLSSILTVQQLQPNVTDIEWLKMNNMKIGCDGDSFVRSYLEKVEQFKPENIINISNVPKRLPSGQRCF 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci317g0002 731 Gene3D - 45 393 - -
Prci317g0002 731 Gene3D - 157 417 - -
Prci317g0002 731 SUPERFAMILY Periplasmic binding protein-like II 437 707 - -
Prci317g0002 731 FunFam Glutamate receptor 574 712 - -
Prci317g0002 731 SMART GluR_14 466 686 IPR001320 GO:0015276|GO:0016020
Prci317g0002 731 CDD PBP1_GABAb_receptor_plant 43 423 IPR044440 -
Prci317g0002 731 Gene3D - 454 573 - -
Prci317g0002 731 Pfam Bacterial extracellular solute-binding proteins, family 3 489 675 IPR001638 -
Prci317g0002 731 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 43 715 IPR015683 -
Prci317g0002 731 Pfam Ligand-gated ion channel 676 697 IPR001320 GO:0015276|GO:0016020
Prci317g0002 731 SUPERFAMILY Periplasmic binding protein-like I 40 456 IPR028082 -
Prci317g0002 731 FunFam Glutamate receptor 464 575 - -
Prci317g0002 731 Pfam Receptor family ligand binding region 65 402 IPR001828 -
Prci317g0002 731 Gene3D - 574 714 - -
Prci317g0002 731 FunFam Glutamate receptor 161 334 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci317g0002 8 704 Ion Channels AT2G29120 32.000 1.30e-114 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci317g0002 - - gmx:100818619 970.689