Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci313g0007 ATGATTTGTTTAAGAGACGGTGAGTTCTTCGTTTACTTGTTTGAGTCTGGTGCTTCTCTTGCCATCAGTTGCATTGCGAAAGCCGGTTTTGGTCTTGGGAGAGTGGACATGGAGGAAAGGTACGAGGCATTGAAGGAGCTTGGTTCTGGGAATTTTGGAGTGGCCAGGCTGGTCAGAGATAAGAAGACTAAAGAGCTCGTTGCTGTCAAATACATTGAAAGAGGGAAAAAGATTGATGAGAATGTTCAACGGGAGATCATCAACCACCGATCTTTAAGGCATCCAAACATTATCGAGTTCAAAGAGGTCTTGCTGACCCCAACTCATTTGGCTATTGTCATGGAGTACGCTGCAGGTGGTGAACTCTTTGAGAAGATATGCAGTGCTGGTAGATTCAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAGCTAATTTCTGGAGTTAGTTACTGTCATTCAATGGAGATTTGTCATAGAGACCTGAAACTGGAGAACACTCTCTTGGATGGAAGTCCAAATCCTCGAGTTAAAATATGTGACTTTGGTTACTCCAAGTCTGCTTTGCTTCATTCTCAACCGAAATCAACCGTTGGAACTCCTGCTTACATCGCTCCGGAGGTTCTGTCCCGAAAGGAGTATGATGGAAAGATTGCAGACGTTTGGTCCTGTGGTGTGACTTTGTATGTCATGTTAGTTGGAGCTTACCCGTTTGAAGAACCTGAAGATCCTAGGAATTTCCGAAAAACGATTGGGAGAATATTGAATGTTCAGTACAGCATACCCGACTATGTACGTGTCTCTGCAGACTGCAAACACCTTCTTTCTCGCATCTTTGTTGCCAATCCTGCAAAGAGGATCAGCATCCCAGAGATAAAACAGCACCCATGGTTTCTGAAGAACTTGCCAAAGGAGATGGCGAAAGCAAAGGAGGAAGCAGAGAAAGAAGAAGGAAGGCAGAGTGTGGAAGAGATAATGAGAATCGTACAAGAGGCAAGAACAACAGTGGGGCAAGGTTCCAAGGGTGGAGATCAAGTTGGTGGAGGGTCATTGGACAGTGGGGATGTTGAGGCAGATGAGGAGGAATCTGAAGTTGATCTTAGTGGTAACTGTGCTGAGAACAACTACGTTGCTCATCTATCCTAG 1143 0.4488 MICLRDGEFFVYLFESGASLAISCIAKAGFGLGRVDMEERYEALKELGSGNFGVARLVRDKKTKELVAVKYIERGKKIDENVQREIINHRSLRHPNIIEFKEVLLTPTHLAIVMEYAAGGELFEKICSAGRFSEDEARFFFQQLISGVSYCHSMEICHRDLKLENTLLDGSPNPRVKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEEPEDPRNFRKTIGRILNVQYSIPDYVRVSADCKHLLSRIFVANPAKRISIPEIKQHPWFLKNLPKEMAKAKEEAEKEEGRQSVEEIMRIVQEARTTVGQGSKGGDQVGGGSLDSGDVEADEEESEVDLSGNCAENNYVAHLS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci313g0007 380 Coils Coil 298 318 - -
Prci313g0007 380 Gene3D Phosphorylase Kinase; domain 1 24 116 - -
Prci313g0007 380 CDD STKc_SnRK2 40 296 - -
Prci313g0007 380 Gene3D Transferase(Phosphotransferase) domain 1 117 305 - -
Prci313g0007 380 SMART serkin_6 41 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci313g0007 380 ProSitePatterns Protein kinases ATP-binding region signature. 47 70 IPR017441 GO:0005524
Prci313g0007 380 FunFam Serine/threonine-protein kinase SRK2E 37 116 - -
Prci313g0007 380 FunFam Serine/threonine-protein kinase SRK2E 117 305 - -
Prci313g0007 380 ProSiteProfiles Protein kinase domain profile. 41 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci313g0007 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Prci313g0007 380 SUPERFAMILY Protein kinase-like (PK-like) 36 304 IPR011009 -
Prci313g0007 380 PANTHER SERINE/THREONINE KINASE 39 324 - -
Prci313g0007 380 MobiDBLite consensus disorder prediction 332 380 - -
Prci313g0007 380 Pfam Protein kinase domain 41 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci313g0007 40 300 CBL-interacting serine-threonine protein kinases AT4G24400 44.238 2.76e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Prci313g0007 Pkinase 2.4e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci313g0007 K14498 - mof:131164015 553.132